Gene Mmcs_4738 details

Gene Information

• Locus tag: Mmcs_4738
• Symbol: ispF
• ID: 4113567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 5016661
• End bp: 5017137
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638033889
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_641898
• Protein GI: 108801701
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.788609
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCTGC CGCGTGTCGG TCTCGGCACC GACGTGCACC CGATCGAGCC GGGCCGGCCC 
TGCCGGCTGC TCGGTCTGCA CTTCGACGGC GAAGACGGGT GCGCCGGACA TTCCGACGGC 
GACGTCGCCG CCCACGCACT CTGCGACGCC CTGCTGTCGG CGGCCGGGCT CGGCGACCTC 
GGTGGCGTCT TCGGCACCGG GCGGCCCGAA TGGGAGGGCG TCAGCGGCGC CGACATGCTG 
CGCCACGTCC GGGGCCTGCT GCAGGAAGCG GGATTTCGGG TCGGCAATGC GACCGTCCAG 
GTGATCGGCA ACCGGCCGAA GATCGGCCCG CGGCGGGCCG AGGCCCAGGA GTTGCTGTCC 
GAACTGATCG GCGCCCCGGT CTCGGTTTCG GCGACGACGA CCGACGGGCT CGGGCTGACC 
GGCCGTGGTG AGGGGCTGGC CGCGATCGCA ACCGCTCTCG TGGTCGATGA GGGATAA 

 

Protein sequence

MSLPRVGLGT DVHPIEPGRP CRLLGLHFDG EDGCAGHSDG DVAAHALCDA LLSAAGLGDL 
GGVFGTGRPE WEGVSGADML RHVRGLLQEA GFRVGNATVQ VIGNRPKIGP RRAEAQELLS 
ELIGAPVSVS ATTTDGLGLT GRGEGLAAIA TALVVDEG