Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4729 |
Symbol | |
ID | 4113558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 5007645 |
End bp | 5008856 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638033880 |
Product | major facilitator transporter |
Protein accession | YP_641889 |
Protein GI | 108801692 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.761713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCGT TCGACCGTTC GACCGGCGAC GATACTCAGC GCTGGGCCTA CCCATTGCTG CTCGTCCTGA GCGGGGTCGC GCTCGGCGTC TCCGGCCTAC CCGCGCCGCT CTACGGCATG TACGAGGCGA ACTGGCATCT GTCCCCGCTG GCCACCACGA TCATTTTCGC GGTGTACGCG ATCGCCGCAC TCGGCGCGGT GCTGGTGTCC GGCCGGATCT CCGACGTGGT CGGCCGCAAG CCGGTGCTGA TCGCCGCCCT CGCGGCGCTG GTGATCGGAC TCGGGGTGTT CCTCGTCGCC GACAACATGG CCCTGCTGCT GCTCGCACGG GCCATCCACG GCGCCGCCGT CGGCTCGATC GTCGTCGCCG GGGCCGCCGC ACTGCTCGAC CTGCGACCCC ACCACGGGGT GCGCTCCGGG CAACTCAGCG GCGTGAGCTT CAACATCGGG ATGACCGTCG CAATCCTCGG ATCGGCGTTG CTGGCTCAGT ACGCACCGCA TCCGCTGCGC ACGCCCTACG CCGTTGTCGC GGTGCTGTGC CTCATCGTCG GCGCCGGTCT CCTGGCACTG CGCGAACCAC ATATCGCACG CACGCGAGGC CGCATCCGCG TCGCAAAACC CGCGGTGCCA CAGGAGATCA GAGGTGACTT CTGGTTCTCC GCGCTGGGCG CCATGGCGTC CTGGTCGGTG CTGGGCGTGT TGCTGTCGCT CTACCCGTCG CTGGCGGCGC GGCAGACGCA TATCGACAAC CTGGTCTTCG GCGGCGCGGT CGTCGGCACC ACGGCGTTCG CCGCCGCGCT CGCCCAACTT GCATCAACGC GGGTGCCGGC CCGTCGCGCC GCGATCGTCG GCGACATCGG CATGGCGCTC TCACTGCTGC TCACGATCCC GGTGCTGCTG AGCCATCAGT GGCCGCTGGT GTTCGTGGCG GCAGCGCTGC TCGGTGCGAC ATTCGGGCTC GGGTTCGGCG GCTCGTTGCG CCACCTGTCC GACGTGGTCC CCGCCGGCAG GCGCGGTGAG ACCATGTCGG CGTTCTACCT GGCGGCGTAC ACGGCGATGG CGGTCCCGAC GCTGCTCGCC GGGTGGGCGG CGACCACCTG GGAACTCGTG GTGGTGTTCC CGTGGTTCGC CGTCGCGGTG GCCACTGCCT GCGTGGGTGC GGCCGTCGCG GGTATGCGTA GCGCCAGAGC CGCTGCCGCC GAAGCCTACT GA
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Protein sequence | MVAFDRSTGD DTQRWAYPLL LVLSGVALGV SGLPAPLYGM YEANWHLSPL ATTIIFAVYA IAALGAVLVS GRISDVVGRK PVLIAALAAL VIGLGVFLVA DNMALLLLAR AIHGAAVGSI VVAGAAALLD LRPHHGVRSG QLSGVSFNIG MTVAILGSAL LAQYAPHPLR TPYAVVAVLC LIVGAGLLAL REPHIARTRG RIRVAKPAVP QEIRGDFWFS ALGAMASWSV LGVLLSLYPS LAARQTHIDN LVFGGAVVGT TAFAAALAQL ASTRVPARRA AIVGDIGMAL SLLLTIPVLL SHQWPLVFVA AALLGATFGL GFGGSLRHLS DVVPAGRRGE TMSAFYLAAY TAMAVPTLLA GWAATTWELV VVFPWFAVAV ATACVGAAVA GMRSARAAAA EAY
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