Gene Mmcs_4658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4658 
Symbol 
ID4113487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4935405 
End bp4936217 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content69% 
IMG OID638033809 
Producthemolysin III family channel protein 
Protein accessionYP_641818 
Protein GI108801621 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.096872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCGCG TCGCCCCCCG GGCGACCGCA CGCCGGATCC CGGTCCGGCA ACACCCGCGA 
TATCGGAGAT CTCCTGAGCG ACCCAGTGCG TGTAATGGCC CGTCCGTGAT CACCGGCCCG
CCGGGTCCGG AGGCGATCGA AGCCCTGCAG CCCGATCCAG TCGACGAACT GATCGTCCGA
CCGCGTGCGC GGGGGCTGAT CCACCTCGTC TCGGCGGTCG TCGCCGTGGT GGCGGGTGCG
GCGCTGGTCG AGGTGGCGTG GACCGGATCG GCATCCTCGC GAGCAGGGTG GGCCGCGCTG
ATCTACGTCG CCGCGATCAT CGCCATGTTC GGGGTGAGCG CGGCGTACCA CCGCGTGCGG
TGGACGTCAC CGTCCGCCGA GAAGTGGATG ATGCGCCTCG ACCACTCGGT GATCTTCGTG
TTCATCGCGG CGACCTACAC CCCGTTCGCG GTGCTCGCAC TGCCGCCCGA CACCGGGACG
AAGGCGCTGA CGATCGTGTG GACCGGGGCC GCTGCCGGTG TCGCCCTCAA GATGCTGTGG
CCGTCCGCGC CGCGCTGGGT GGGCGTACCC CTGTATCTGA TGCTCGGCTA TGTGGCGCTG
CTGTTCGCCG AGGCGCTGCT GATCGGTGCC GGTTTCACCG TCGTCGCGCT GCTCGCCGCC
GGTGCGGTCC TCTACAACAT CGGTGCGATC TTCTATGGCG TCCGCTGGCC GAATCCGTGG
CCGAACACGT TCGCCCACCA CGAGTTCTTC CACGCGTTCA CCGTGGCCGC GGCGGTCTGC
CACTTCGCCG CCATCTGGCT CGTCATCCGG TAG
 
Protein sequence
MQRVAPRATA RRIPVRQHPR YRRSPERPSA CNGPSVITGP PGPEAIEALQ PDPVDELIVR 
PRARGLIHLV SAVVAVVAGA ALVEVAWTGS ASSRAGWAAL IYVAAIIAMF GVSAAYHRVR
WTSPSAEKWM MRLDHSVIFV FIAATYTPFA VLALPPDTGT KALTIVWTGA AAGVALKMLW
PSAPRWVGVP LYLMLGYVAL LFAEALLIGA GFTVVALLAA GAVLYNIGAI FYGVRWPNPW
PNTFAHHEFF HAFTVAAAVC HFAAIWLVIR