| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4617 |
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| Symbol | |
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| ID | 4113446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 4890261 |
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| End bp | 4891463 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638033768 |
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| Product | virulence factor MCE-like protein |
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| Protein accession | YP_641777 |
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| Protein GI | 108801580 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.171708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGACA TCGACGCGAA GCGCAGTCAC GTACGCATCG CCGCCGCGAT CATGGCTGCG
ATCGTCGCCG CCGCCGCGGT GTTCACCTAT CTGTCGTACA CCGCGGCATT CACCTCGACC
GACACCGTCA CCGTGGTCTC ACCGCGCGCC GGCCTGGTCA TGGAGACCGA GGCGAAGGTG
AAATACCGCG GCATCCAGAT CGGCGAGGTC AAGGAGATCG AGTACGCAGG AGACCGGGCG
AAGTTGACCC TGGCCATCCG TAGCGACGAG ATGAAGTACA TCCCCGCCAA CGCGCCCGTG
CGCATCGCGG GCACAACGGT GTTCGGCGCC AAGTCGGTCG AGTTCATCCC GCCGGAGAAC
GCGCAGCAGA CGTCGTTGCG ACCCGGGGCC GAGGTGCAGG CCTCCAACGT CCAGCTCGAG
GTCAACACGT TGTTCCAGAC CCTGACCGAC GTGCTCGGCA AGATCGACCC GATCAACCTC
AACGCCACGC TCAGCGCTCT GGGGGAGGGT TTGCGCGGCA ACGGCGACGA CATGGGCGCG
CTGCTGGAGG GCCTCAACTA CTACGTGGGT CAGCTCAACC CGAAACTGCC CACGCTGCAG
GAGGATCTGC GCAAGGCCGG TGTGGTGGCC AACATCTACG GCGACGCAGG ACCGGGCATC
GCGCGAATCC TCGACAACGC CCCGACCATC AGCAACACGA TCGTCGATCA GCAACACAAC
CTGAACACGA CGCTGCTGGC CGCCACGGGT CTGGCGAACA ACGGCACGGC CACGTTGGAA
CCGGCCGCCG ACAACTACAT CGCCGCGATC CAGCGGTTGC GGGCGCCGCT CAAGGTGGCC
GGCGAGTACT CGCCGGAATA TGGCTGCATG CTGAAAGGCA CCGCCCGAGC GATCGAGAGG
TTCGCACCGA TCATCGGCGG TATCCGGCCG GGCCTGTTCG TGTCGTCGAA CTTCCTGCCC
GGGTCGCCTG CGTACACGTT TCCCGAGAGC CTTCCCATCG TCAACGCCAC CGGCGGTCCG
AACTGCCGGG GGCTACCTGA TCTGCCGAGT AAACAATATG GCGGCTCGTG GTACCACACC
CCGTTCGTGG TCACCGACAA CGCCTATGTG CCGTACCAGC CGAACACCGA GGTGCAGTTC
GACGCTCCGT CGACGGCGCA GTTCCTGTTC AACGGCGCGT TCGCGGAAAA GGACGAGTAC
TGA
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| Protein sequence | MADIDAKRSH VRIAAAIMAA IVAAAAVFTY LSYTAAFTST DTVTVVSPRA GLVMETEAKV
KYRGIQIGEV KEIEYAGDRA KLTLAIRSDE MKYIPANAPV RIAGTTVFGA KSVEFIPPEN
AQQTSLRPGA EVQASNVQLE VNTLFQTLTD VLGKIDPINL NATLSALGEG LRGNGDDMGA
LLEGLNYYVG QLNPKLPTLQ EDLRKAGVVA NIYGDAGPGI ARILDNAPTI SNTIVDQQHN
LNTTLLAATG LANNGTATLE PAADNYIAAI QRLRAPLKVA GEYSPEYGCM LKGTARAIER
FAPIIGGIRP GLFVSSNFLP GSPAYTFPES LPIVNATGGP NCRGLPDLPS KQYGGSWYHT
PFVVTDNAYV PYQPNTEVQF DAPSTAQFLF NGAFAEKDEY
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