| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4598 |
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| Symbol | |
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| ID | 4113427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 4871044 |
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| End bp | 4872723 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638033749 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_641758 |
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| Protein GI | 108801561 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.541891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAGA TCGAGACCGG CGACCTGTGG TGGAAGAACG CCGTCTTCTA CTGCGCCGAC
ATCGAGACGT TCTACGACTG GAACGGCGAC GGCACCGTCG ACATCCGGGG CATGACCGAG
CGCATCGAGT ACCTCTTCGA CCTCGGGGTC ACCTGCCTGT GGCTGATGCC GTTCTATCCG
ACCGCCCGCA AGGACGACGG CTACGACATC ATCGACTTCT TCGGGGTCGA TCAGCGCCTG
GGCAACCTCG GTGACTTCGT CGAGCTGGTG CGAACCGCAC GATCCAAGGG CATCCGGGTG
ATCGTCGACT TCGTCATGAA CCACACCTCC GATGCCCACC CCTGGTTCAA ATCCGCCCGG
CGCAGCAAGG ACGACCCGTA CCGCGATTAC TACGTGTGGA GTGAGACCGA GCCCAAGTCG
AGTCCGGCCG ACGTCGTCTT CCCCGACCAG GAGGACAGCA TCTGGGAGCA GGAACCCAAA
ACCGGCGAGT GGTACCTGCA TCACTTCTAC AAGCACCAGC CCGACCTGAA CATCGCCAAT
CCCAAAGTGC AGGAGGAGAT TTCGCGCACA CTCGGCTTCT GGTTGCAACT CGGCGTCTCG
GGTTTCCGGG TCGACGCCGT CCCCTTCCTG TTCGCCCGCG ACGGAGTGCC CGGCGACCCC
GGCGTCTTCG ATCCCTACGA ATACCTCGGG GACGTCCGCA ACTTCGTCAA CCGGCGGGTT
GGTGACGCGG TGCTGCTCGG CGAGGTGAAC GTGCCCTACG ACGATCAGAA GTCGTTCTTC
GGGGGCCCCG ACGGCGACGG ACTCAACATG CAGTTCGACT TCATCGGCAT GCAGAACATG
TACCTCTCGC TGGCCCGGGG CGACGCCGGC CCGATCGCCG CGGCGCTGCG CGAACGCCCA
CCGCTCGACG AGACGAGCCA GTGGGCGAAC TTCGTGCGCA ACCACGACGA GCTCACGCTC
GACAAACTGG GCGACGCGGA ACGGCAGGAG ATCTTCGACG CCTTCGGACC CGAGCGCGAC
ATGCAGCTCT ACGGCCGCGG GCTGCGCCGA CGCCTGCCGG CGATGCTCGG CGGGGACGAA
CGGCGGATGC GCATGGTCTA CTCGCTGGCG TTCTCGCTGC CCGGCACTCC GGTCCTCTAC
TACGGCGAGG AGATCGGGAT GGCCGAGAAC CTCGACATCC CAGGGCGGTT CGCCGTGCGG
GTTCCGATGC AGTGGACCAG CGACGACAAC GGCGGTTTCT CCAGGGCCGC CGCGCGCCGA
CTCCCCCGCC CGATCACCGA CGGCCTGTAC GGCCCCGACC GGGTGAACGT CGCCGACCAG
CGCCACGACC ACCAGTCGTT CTGGTGGTTC ATCCGCGATC TCATCTACAC CTATCGCCAG
CAGCCGGAGA TCGGCTGGTC GACGGCCGAG GTGCTCGACC AGCCCAACCC TGCGGTGCTC
GCGCACTGCT GCCGGGAGAA GAGTGGGTGG ACGATGGTGG GGCTGCACAA TTTCGGCGCC
GACCGGTGCA TGGTGCCGAT CCAGATCGAG GACGCCCCGG AGGGGTCGAC GCTCGTCGAC
CTGCTGGACG GGCTGTCGGT GCACGAACTG GACGCGAAGG GACGGCTCGA GATCGGCCTG
GACGGTTACG GTTACCGTTG GCTACGCCTG GTCCGGCCGG GCGACGACCC GATCATCTGA
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| Protein sequence | MRKIETGDLW WKNAVFYCAD IETFYDWNGD GTVDIRGMTE RIEYLFDLGV TCLWLMPFYP
TARKDDGYDI IDFFGVDQRL GNLGDFVELV RTARSKGIRV IVDFVMNHTS DAHPWFKSAR
RSKDDPYRDY YVWSETEPKS SPADVVFPDQ EDSIWEQEPK TGEWYLHHFY KHQPDLNIAN
PKVQEEISRT LGFWLQLGVS GFRVDAVPFL FARDGVPGDP GVFDPYEYLG DVRNFVNRRV
GDAVLLGEVN VPYDDQKSFF GGPDGDGLNM QFDFIGMQNM YLSLARGDAG PIAAALRERP
PLDETSQWAN FVRNHDELTL DKLGDAERQE IFDAFGPERD MQLYGRGLRR RLPAMLGGDE
RRMRMVYSLA FSLPGTPVLY YGEEIGMAEN LDIPGRFAVR VPMQWTSDDN GGFSRAAARR
LPRPITDGLY GPDRVNVADQ RHDHQSFWWF IRDLIYTYRQ QPEIGWSTAE VLDQPNPAVL
AHCCREKSGW TMVGLHNFGA DRCMVPIQIE DAPEGSTLVD LLDGLSVHEL DAKGRLEIGL
DGYGYRWLRL VRPGDDPII
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