Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4492 |
Symbol | |
ID | 4113321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4770240 |
End bp | 4772387 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638033638 |
Product | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_641652 |
Protein GI | 108801455 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.224466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGAGA ACACCATCAC GTGGGAGCAG GACTCCGACG GCATCGTGAC CCTCACGCTG GACGATCCGA CCGGGTCGGC CAACGTGATG AACGATCACT ACAAGGAGTC GATGCACAAC GCCGTCGAGA GGCTGGTGGC CGAGAAGGAT TCGATCACCG GCGTCGTCAT CACCAGCGCG AAGAAGACCT TCTTCGCCGG CGGTGACCTC AAGAGCATGA TCAACACCGG TCCGGACGAC GCGGAAGCGG TGTTCGAGAA TGTCGAGTCG ATCAAGGCCG ACCTGCGCAA GCTCGAGACC CTGGGCAAGC CGGTCGTTGC CGCGATCAAC GGCGCCGCAC TCGGCGGTGG CCTGGAGATC GCGCTGGCGT GCCACCACCG CATCGCCGCC GACGTCAAGG GTTCGGTCAT CGGCCTGCCC GAGGTCACGC TGGGTCTGCT GCCCGGCGGC GGCGGCGTCA CCCGCACCGT GCGCATGTTC GGCATCCAGA AGGCGTTCAT GGAGGTGCTG AGCCAGGGCA CCCGCTTCAA GCCCGGCAAG GCCGTCGAAA TCGGGCTTGT CGACCGGCTC GTCCAGTCCG TGGATGAGCT CATCCCCGCC GCGAAGGCAT GGATCAAGGC CAACCCCGAG GCGCACACCC AGCCGTGGGA TGTCAAGGGC TACAAGATGC CCGGCGGCAC GCCGAGCAGC CCCGGCCTGG CGAGCATCCT GCCGTCGTTC CCGGCCCTGC TCAAGAAGCA GCTCAAGGGT GCGCCGATGC CGGCGCCGCG CGCCATCCTC GACGCCGCGG TCGAGGGTGC CCAGGTCGAC TTCGACTCGG CCAGCCGCAT CGAGAGCCGC TACTTCGTCT CGCTGGTCAC CGGTCAGGTC GCCAAGAACA TGATCCAGGC GTTCTTCCTG GACCTGCAGA CCATCAACGG CGGCGGCTCG CGTCCCGACG GCATCGCCAA GCAGGACATC AAGAAGATCG GCGTGCTCGG CGCCGGCATG ATGGGTGCGG GCATCGCCTA CGTCTCGGCC AAGGCCGGCT ACGACGTGGT GCTCAAGGAC GTGTCGCTGG AGAACGCCCA GAAGGGTAAG GCCTACAGCG AGAAGATCGA GGCCAAGGCC CTCGAGCGCG GCCGCACCAC CAAGGAGAAG TCCGACGCGC TGCTGGCCCG CATCACCCCG GCGGCCGACC CGGCCGACCT CAAGGGCGTC GACTTCGTCA TCGAGGCCGT CTTCGAGAAC CAGGAACTCA AGCACAAGGT GTTCCAGGAG ATCGAGGACA TCGTCGAGCC CAACGCACTG CTCGGCTCGA ACACCTCCAC GCTGCCGATC ACCGGTCTGG CGACCGGTGT GAAGCGCCAG GAGGACTTCA TCGGCATCCA CTTCTTCTCC CCGGTCGACA AGATGCCGCT GGTCGAGATC ATCAAGGGCG AGAAGACCTC CGACGAGGCG CTGGCCCGTG TGTTCGACTA CACGCTGGCC ATCGGCAAGA CGCCGATCGT GGTCAACGAC AGCCGCGGCT TCTTCACCAG CCGCGTCATC GGCACCTTCG TCAACGAGGC GCTGGCCATG CTCGGTGAGG GTGTCGAGCC GGCGAGCATC GAGAGGGCAG GCAGCATGGC CGGTTACCCG GCGCCGCCGC TGCAGCTGTC CGACGAGCTC AACCTCGAGC TGATGCAGAA GATCGCGACC GAGACCCGCA AGGCCACCGA GGCCGCGGGC GGCACGCACG ATCCGCACCC GGCCGAGGCC GTCGTCAACA AGATGATCGA GATCGGCCGG CCCAGCCGCC TCAAGGGTGC CGGCTTCTAC GAGTACGTCG ACGGGAAGCG GACCGGTCTG TGGCCGGGCC TGCGGGAGAC GTTCGGTGTT GGAAGCGCGG ACATCCCGCT GCAGGACATG ATCGACCGCA TGCTGTTCGC CGAGGCGATC GAGACGCAGA AGTGCCTCGA CGAGGGTGTG CTCACCTCGA CCGCCGACGC CAACATCGGC TCGATCATGG GCATCGGCTA CCCGCCGTAC ACCGGTGGTT CGGCGCAGTA CATCGTCGGA TACGAAGGTG CGCTCGGGAC CGGCAAGGAG GCCTTCGTGG CCCGCGCCCG TGAGCTGGCC GAGCGTTACG GCGACCGGTT CACCCCGCCG GACTCGCTCA CCAAGTAG
|
Protein sequence | MAENTITWEQ DSDGIVTLTL DDPTGSANVM NDHYKESMHN AVERLVAEKD SITGVVITSA KKTFFAGGDL KSMINTGPDD AEAVFENVES IKADLRKLET LGKPVVAAIN GAALGGGLEI ALACHHRIAA DVKGSVIGLP EVTLGLLPGG GGVTRTVRMF GIQKAFMEVL SQGTRFKPGK AVEIGLVDRL VQSVDELIPA AKAWIKANPE AHTQPWDVKG YKMPGGTPSS PGLASILPSF PALLKKQLKG APMPAPRAIL DAAVEGAQVD FDSASRIESR YFVSLVTGQV AKNMIQAFFL DLQTINGGGS RPDGIAKQDI KKIGVLGAGM MGAGIAYVSA KAGYDVVLKD VSLENAQKGK AYSEKIEAKA LERGRTTKEK SDALLARITP AADPADLKGV DFVIEAVFEN QELKHKVFQE IEDIVEPNAL LGSNTSTLPI TGLATGVKRQ EDFIGIHFFS PVDKMPLVEI IKGEKTSDEA LARVFDYTLA IGKTPIVVND SRGFFTSRVI GTFVNEALAM LGEGVEPASI ERAGSMAGYP APPLQLSDEL NLELMQKIAT ETRKATEAAG GTHDPHPAEA VVNKMIEIGR PSRLKGAGFY EYVDGKRTGL WPGLRETFGV GSADIPLQDM IDRMLFAEAI ETQKCLDEGV LTSTADANIG SIMGIGYPPY TGGSAQYIVG YEGALGTGKE AFVARARELA ERYGDRFTPP DSLTK
|
| |