| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4457 |
|---|
| Symbol | |
|---|
| ID | 4113286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4739733 |
|---|
| End bp | 4740380 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638033603 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_641617 |
|---|
| Protein GI | 108801420 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGATC TCGACGGCGC CCCGGTTCTC GGGCTGCGCG AGCGCAAGAA ACAGCGCACC
CGAACCACCC TGATCAACGC CGCCGTCGAA CTGTGCGACC GGCAGGGTTT CGAGAACACC
ACCGTCGACC AGATCGCCGC GGTCGCCGAC GTCTCGCCGC GGACCTTCAG CCGGTACTTC
GCGACCAAGG AAGCGGTGGT GCTGGCCGTC ATCGACGACA TCATCGAGAT CGTCGCGGTC
GAACTCCGCA GGCAACCGCC GGACATCAGC CACCTCGAGG CGATCTTCCG CAGCCACATC
CACGCGTTCA ACGCCACCAA GCGGGCCCCG CCGACGGGGC TGACCGAGGA GCGGCTGCTC
GCGTCGGCGC GCATCGTGAC GTCGTCGGAA ACCCTCATAC ACGCGGCCAC CCGGTTCCGG
CTGGACGCGG TGAACGCCGC GCTCGTCGAG CGTATGGGTA CCGCACCCGA CGACCGGCGG
CTGCAACTGG TGGCCGCGGT GTGGGGCGCG ATCATGATGG CCGCACTCGC CGACCTCGGG
CCCGTCGCCG ACTGGGGCAC GATGACCGCC GACGGCATCG TGTCCCGGAT CGAGCTGGCG
TATGCCCAGT TCCTCGACGT GACCGCCGAC GTCAAGCAGC TGGTCTGA
|
|---|
| Protein sequence | MVDLDGAPVL GLRERKKQRT RTTLINAAVE LCDRQGFENT TVDQIAAVAD VSPRTFSRYF
ATKEAVVLAV IDDIIEIVAV ELRRQPPDIS HLEAIFRSHI HAFNATKRAP PTGLTEERLL
ASARIVTSSE TLIHAATRFR LDAVNAALVE RMGTAPDDRR LQLVAAVWGA IMMAALADLG
PVADWGTMTA DGIVSRIELA YAQFLDVTAD VKQLV
|
|---|
| |