Gene Mmcs_4446 details

Gene Information

• Locus tag: Mmcs_4446
• ID: 4113275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 4728931
• End bp: 4730814
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638033592
• Product: ABC transporter related
• Protein accession: YP_641606
• Protein GI: 108801409
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.405491
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATCG AAACGGTCGC CCGGCAGACC CTGTACCGCC AGGCGCACGC CCGCGGCGGA 
GATCTGCACT CGCTGGCCGA CCGTGCCCTG CTGCGCCGCA TCTGGCGCTT CGCCGGCCGG 
CACCACCGCA GGCTCGCCGC GTTCGTGGCG GTCAGCGTGG TGAGCGCGAC GCTGGCGGTG 
GCCACGCCAG TGCTGGCCGG CCGGGTGGTC GACGAGATCA CGCGCGGCGG CGCGGCGTCG 
GTCGTGATCG GGCTCGCCGC CGTCATCGCG ACCGTCGCAC TCGCCGAGGC CGGGGTGTCG 
CTGCTGACGC GCTGGCTGTC GTCGAACATC GGCGAGGGCC TCATCTTCGA CCTGCGCACC 
GCCGTCTTCG AGCACGTCCA GAAGATGCCC GTGGCGTTCT TCATGCGCAC CCGCACCGGT 
GCGCTGGTCA GCCGCCTCGG CAACGATGTG CTCGGCGCAC AGCGCGCGTT CTCCGACACG 
CTGTCCGGGG TGGTCTCCAA CCTGGTCACG CTGACGCTGA CGCTCGGGGT GATGCTCGCG 
ATCTCCTGGC AGATCACCGT CGTCGCACTC GTGCTTGTGC CGGTTTTCGT GCTGCCCGCC 
CGCCGCATCG GCGCCAGGAT GGCGCACCTG TCGCGGGAGA GCGCCATCCA CAACGCGACG 
ATGAACACGC AGATGACCGA ACGGTTCTCC GCGCCCGGCG CCACCCTGGT CAAGCTGTTC 
GGCCGCCCCG AGAGCGAATC CCACGAGTTC GCGGTCCGCG CCGGGCGCGT CCGCGACATC 
GGGGTGCGCT CGGCGATGCT GCAGTCGACG TTCATGAACT CGCTGACGCT GATGTCGGCG 
CTCGCCCTGG CGCTGGTGTA CGGGCTCGGC GGGGTGATCG CCCTCGGCGG TCATCTGCAG 
GCCGGGGCGA TCGTGTCGCT GGCGCTGCTG TTGACCCGTC TCTACGCGCC GCTGACCGCG 
TTGGCCAATG CCCGGGTCGA GATCGCCAGT GCGCTGGTGT CTTTCGAGCG TGTCTTCGAG 
GTGCTGGATC TGGAGCCGAT CATCCGGGAG GAGCCCGACG CCGTCGCGGT ACCCGACGGC 
CCGGTGCGCG TCGAATTTGA TCACGTGCGG TTCTCCTACC CGACGGCGGA CAAGGTCTCG 
CTGGCCTCGC TCGAGGAGGT CGCGGTGCTC GACGACCGCG ACGACGGTGA GGTGCTGCAC 
GACATCTCGT TCACCGCGGA GCCGGGGCAG ATGGTCGCGC TGGTCGGGTC TTCGGGCGCC 
GGCAAGTCGA CGATCGCCGC GCTGCTGGCC CGCCTCTACG ACGTCGACTC CGGTGCGGTC 
CGGCTGGCCG GGATGGACGT GCGCGACGTG ACGTTCGAAT CGCTGCGCGA CACCGTCGGC 
ATGGTCACCC AGGACGGACA CCTGTTCCAC GAGTCGATCC GGGCCAACCT GCTGCTGGCC 
GCCCCCGAAA CCGAATCCGA TGACCGGCTC TGGGAGGTGC TGCGCCGCGC CCGGTTGGCC 
GATGTCGTCG CCGCGATGCC CGACGGGCTC GACACGGTTG TCGGTGAGCG TGGCTACCGT 
CTGTCCGGCG GGCAACGGCA ACGGCTGACC ATCGCCCGCC TGCTGTTGGG GAGGTCACGG 
GTGGTGGTGC TCGACGAGGC GACGGCGTCG CTGGACTCGG CCTCGGAGGC CGCCGTTCAA 
CAGGCCCTCG GTGAGGCGCT GGCCGGGCGG ACGTCGCTGG TCATCGCCCA CCGGCTGTCG 
ACCGTGCGGG CCGCCGACCT GATCCTGGTG GTCGAGGACG GCCGGATCGT CGAGCGCGGG 
ACGCATCGCC AGCTCATCGG CCGCGGCGGC CGCTACGCCG AGTTGTACGA GACCCAGTTC 
GCGGAGCCGG AGGCGGTTGC GTGA 

 

Protein sequence

MSIETVARQT LYRQAHARGG DLHSLADRAL LRRIWRFAGR HHRRLAAFVA VSVVSATLAV 
ATPVLAGRVV DEITRGGAAS VVIGLAAVIA TVALAEAGVS LLTRWLSSNI GEGLIFDLRT 
AVFEHVQKMP VAFFMRTRTG ALVSRLGNDV LGAQRAFSDT LSGVVSNLVT LTLTLGVMLA 
ISWQITVVAL VLVPVFVLPA RRIGARMAHL SRESAIHNAT MNTQMTERFS APGATLVKLF 
GRPESESHEF AVRAGRVRDI GVRSAMLQST FMNSLTLMSA LALALVYGLG GVIALGGHLQ 
AGAIVSLALL LTRLYAPLTA LANARVEIAS ALVSFERVFE VLDLEPIIRE EPDAVAVPDG 
PVRVEFDHVR FSYPTADKVS LASLEEVAVL DDRDDGEVLH DISFTAEPGQ MVALVGSSGA 
GKSTIAALLA RLYDVDSGAV RLAGMDVRDV TFESLRDTVG MVTQDGHLFH ESIRANLLLA 
APETESDDRL WEVLRRARLA DVVAAMPDGL DTVVGERGYR LSGGQRQRLT IARLLLGRSR 
VVVLDEATAS LDSASEAAVQ QALGEALAGR TSLVIAHRLS TVRAADLILV VEDGRIVERG 
THRQLIGRGG RYAELYETQF AEPEAVA