Gene Mmcs_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4404 
Symbol 
ID4113233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4682960 
End bp4683880 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID638033550 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_641564 
Protein GI108801367 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0264564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACT TGAGGTACGA CGGCCGCGTC GCCGTCGTCA CCGGCGGTGG CCGCGGACTC 
GGCCGGGCGT ACGCGCTGCT GCTCGCCTCC CGCGGGGCGA AGGTCGTCGT CAACGATCTG
GGCGGCGACC TCACCGGGGA CGGTGTCGAT GCGGGACCGG CCCACGAGGT CGTCCGCGAG
ATCGTCGCCG CCGGAGGCGA GGCGGTTGCC AGCACCGACT CCGTCGCGAC GCCCGAGGGC
GGCAGGGCGA TCGTCGACAC GGCGATGGAC ACCTACGGCC GGCTGGACAT CCTGATCCAC
AACGCGGGCA ACGTCCGGCG CGCATCGCTG AGTGAGATCA GCGACGAGGA CTTCGATGCG
GTGGTCGACG TCCATCTGCG CGGCGCGTTC CACGTTGTGC GGCCGGCCTT TCCGGTGATG
TGTGACGCCG GCTACGGCCG CATCGTGCTG ACGTCGTCCA TCGGTGGTCT CTACGGCAAT
CACGACGTGG TGAACTACGC GGTCGCCAAG GCGGGGGTGA TCGGCTTGTC CAACGTCGCC
GCCATCGAAG GGGCCGAGTA CGGGGTGCGT AGCAACGTCA TCGTGCCGGC GGCCGTCACC
CGGATGGCCG AGGGTATCGA CACGTCGGCC TATCCGCCGA TGGATCCGGA ACTGGTGGCG
CCGACCGTCG GCTGGTTGTC ACACGAAACC TGTTCGGTGA CAGGCGAGAT GTTCATCGCG
CTGGCCGGCA GGGTGGCCAC CGCCGTCCTC GTCGAGACGC CGGGTGTGTA CCGGTCGTCG
TGGACGGTCG AGGACGTCGC CGCCGACCTC GACGCCATCC GCGACCGTTC ACACCCCGTG
GTGTTCCCGG TGGTGCCCGA CGGCCACAAC GCCCACATCC GCTACAGCTT CGCGATGGCC
GCCCAGAAGG CGGGGACCTG A
 
Protein sequence
MTDLRYDGRV AVVTGGGRGL GRAYALLLAS RGAKVVVNDL GGDLTGDGVD AGPAHEVVRE 
IVAAGGEAVA STDSVATPEG GRAIVDTAMD TYGRLDILIH NAGNVRRASL SEISDEDFDA
VVDVHLRGAF HVVRPAFPVM CDAGYGRIVL TSSIGGLYGN HDVVNYAVAK AGVIGLSNVA
AIEGAEYGVR SNVIVPAAVT RMAEGIDTSA YPPMDPELVA PTVGWLSHET CSVTGEMFIA
LAGRVATAVL VETPGVYRSS WTVEDVAADL DAIRDRSHPV VFPVVPDGHN AHIRYSFAMA
AQKAGT