Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4404 |
Symbol | |
ID | 4113233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4682960 |
End bp | 4683880 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638033550 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_641564 |
Protein GI | 108801367 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0264564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGACT TGAGGTACGA CGGCCGCGTC GCCGTCGTCA CCGGCGGTGG CCGCGGACTC GGCCGGGCGT ACGCGCTGCT GCTCGCCTCC CGCGGGGCGA AGGTCGTCGT CAACGATCTG GGCGGCGACC TCACCGGGGA CGGTGTCGAT GCGGGACCGG CCCACGAGGT CGTCCGCGAG ATCGTCGCCG CCGGAGGCGA GGCGGTTGCC AGCACCGACT CCGTCGCGAC GCCCGAGGGC GGCAGGGCGA TCGTCGACAC GGCGATGGAC ACCTACGGCC GGCTGGACAT CCTGATCCAC AACGCGGGCA ACGTCCGGCG CGCATCGCTG AGTGAGATCA GCGACGAGGA CTTCGATGCG GTGGTCGACG TCCATCTGCG CGGCGCGTTC CACGTTGTGC GGCCGGCCTT TCCGGTGATG TGTGACGCCG GCTACGGCCG CATCGTGCTG ACGTCGTCCA TCGGTGGTCT CTACGGCAAT CACGACGTGG TGAACTACGC GGTCGCCAAG GCGGGGGTGA TCGGCTTGTC CAACGTCGCC GCCATCGAAG GGGCCGAGTA CGGGGTGCGT AGCAACGTCA TCGTGCCGGC GGCCGTCACC CGGATGGCCG AGGGTATCGA CACGTCGGCC TATCCGCCGA TGGATCCGGA ACTGGTGGCG CCGACCGTCG GCTGGTTGTC ACACGAAACC TGTTCGGTGA CAGGCGAGAT GTTCATCGCG CTGGCCGGCA GGGTGGCCAC CGCCGTCCTC GTCGAGACGC CGGGTGTGTA CCGGTCGTCG TGGACGGTCG AGGACGTCGC CGCCGACCTC GACGCCATCC GCGACCGTTC ACACCCCGTG GTGTTCCCGG TGGTGCCCGA CGGCCACAAC GCCCACATCC GCTACAGCTT CGCGATGGCC GCCCAGAAGG CGGGGACCTG A
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Protein sequence | MTDLRYDGRV AVVTGGGRGL GRAYALLLAS RGAKVVVNDL GGDLTGDGVD AGPAHEVVRE IVAAGGEAVA STDSVATPEG GRAIVDTAMD TYGRLDILIH NAGNVRRASL SEISDEDFDA VVDVHLRGAF HVVRPAFPVM CDAGYGRIVL TSSIGGLYGN HDVVNYAVAK AGVIGLSNVA AIEGAEYGVR SNVIVPAAVT RMAEGIDTSA YPPMDPELVA PTVGWLSHET CSVTGEMFIA LAGRVATAVL VETPGVYRSS WTVEDVAADL DAIRDRSHPV VFPVVPDGHN AHIRYSFAMA AQKAGT
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