| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4396 |
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| Symbol | |
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| ID | 4113225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 4674119 |
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| End bp | 4675834 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638033542 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding protein |
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| Protein accession | YP_641556 |
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| Protein GI | 108801359 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGTCC CCGTCTACAA ACGCATTCTC GACCTGTTCG AGGCCGAGGG TGTGAACACG
TTGTTCGGCA TCCCGGATCC GAACTTCGTG CACATGTTCA CCGAGGCCGA GGCGCGCGGA
TGGTCGGTGG TGGCACCGCA TCACGAGCTG AGCGCCGGGT TCATGGCCGA GGCGGCGTCC
CGGATGACCG GTAAGCCGGG ATTGTGCATC GGCACGCTTG GGCCGGGTGT GGCCAACATC
GCGGGCGCGA TGATGTGCGC GCTGGTGGAG AACTCACCGG TGATCTTCCT CGGTGGGCAG
CGCGCCCGCA TCACCGAACG GCGGGTGCGC CGCGGCCGCA TCCAATTCGT CCAGCAGGAA
GGCCTTTTCA CGCCTTCGGT CAAGTTCAGC AGCTCGATCG AATACGCCGA CCAGACCGAC
GAGATCATCC GGGAGGCGAT CCGCCGCTCG ATGTCGGGCA CACCGGGACC GAGCTACATC
GAGTACCCGT CGCACGTCAT CCTCGAAGAG CTCGACGTGC CCGAGCCGTT GCCGCCCAAC
CGTTATCGTC TGGTCAACCA GGGTGCCGGT GAGCGCGAGA TCGCCGAGGC CGCCACCCTG
ATCCGCGAGG CGAAGAGCCC GATCCTGTTG GTGGGCCACG GCGTTCACAC CTCCCGCACC
CAGGAACAGG TCAGGGAGCT GGCCGAGCTG ATGGCGTGCC CGGTGATCCA GACCTCGGGT
GGGACCTCGT TCATCCCGGG CCTGGAGGAC CGGACCTTCC CGTACCTGTT CTCCCCGGCC
GCCAACGAGG CCGTCGAGCA GTCCGACCTG TGCGTGGCGC TGGGCACCGA ACTCGGTGAG
CCGATGCACT ACGGCCGCAC GCAGCACTGG GCCGGCAACG ACGCCAACCG CAAGTGGGTC
TACGTCGAGC AGGATCCGAC CGCGATCGGC GTGAACCGGC AGTTCGACGT CCCCCTGGTC
GGCGATCTGC GTGGGGTGGT GCCGCAACTG GTCGACGCGC TACGGGACGC CCCGCGCACC
CCGTCGGCCA CACTGGAGTC CCTGGTCGAA GCCGACGCCG CCGAGATCGC CCGGGTGGCC
GAGGAGGCTC CGAGCGGTCG CACCCCGGTC CATCCGGCCC GCTTCGTCGT CGAGGCCACC
AAGGCCTTCA ACGAGTACGC CGAGGACGGC ATCATGGTCC GCGACGGCGG CGCCACCGTG
ATCTTCCAGT GGACCTACTC GCAGGCCAAA CCGCGCGACG TCATCTGGAA CCAGAACTTC
GGTCACCTCG GCACGGGCCT GCCGTATGCC GTCGGTGCGT CGGTCGCCGA GGGCCGCAAG
CGACCGGTCA TGCTGCTCAC CAGCGACTCG GCGTTCCTGT TCCACATCGC CGAACTGGAG
ACCGCCGCCC GCGAGGGCCT GCCGCTGGTC TGCGTGGTCG GCGTCGACCA CCAGTGGGGT
CTCGAAGTGG GCGTCTACAA GCGCACATTC GAGCAGCCGT CGCCGCAGCC CGGTGTGCAC
TGGAGCAAGG ACGTCCGGAT GGACAAGATC GCCGAGGGCT TCGGCTGCCA CGGCGAGTTC
GTCGAGAAGG ACGACGAGAT CGGCCCGGCG ATCCAGCGGG CGTACGCCAG CGGGAAGACC
GCCGTCGTGC ACGTCTGCAT CGATCCGAAG GCCAACTCCG AGGAGATGCC GAAGTACGAC
CGATTCCGCA CCTGGTATGC AGAAGGCACC CAGTAG
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| Protein sequence | MGVPVYKRIL DLFEAEGVNT LFGIPDPNFV HMFTEAEARG WSVVAPHHEL SAGFMAEAAS
RMTGKPGLCI GTLGPGVANI AGAMMCALVE NSPVIFLGGQ RARITERRVR RGRIQFVQQE
GLFTPSVKFS SSIEYADQTD EIIREAIRRS MSGTPGPSYI EYPSHVILEE LDVPEPLPPN
RYRLVNQGAG EREIAEAATL IREAKSPILL VGHGVHTSRT QEQVRELAEL MACPVIQTSG
GTSFIPGLED RTFPYLFSPA ANEAVEQSDL CVALGTELGE PMHYGRTQHW AGNDANRKWV
YVEQDPTAIG VNRQFDVPLV GDLRGVVPQL VDALRDAPRT PSATLESLVE ADAAEIARVA
EEAPSGRTPV HPARFVVEAT KAFNEYAEDG IMVRDGGATV IFQWTYSQAK PRDVIWNQNF
GHLGTGLPYA VGASVAEGRK RPVMLLTSDS AFLFHIAELE TAAREGLPLV CVVGVDHQWG
LEVGVYKRTF EQPSPQPGVH WSKDVRMDKI AEGFGCHGEF VEKDDEIGPA IQRAYASGKT
AVVHVCIDPK ANSEEMPKYD RFRTWYAEGT Q
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