Gene Mmcs_4371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4371 
Symbol 
ID4113201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4651903 
End bp4652484 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content67% 
IMG OID638033517 
ProductRNA polymerase sigma factor SigK 
Protein accessionYP_641532 
Protein GI108801335 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.155172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC TGACCCAGCC GGTTAGGCTA CCGTTCGTGA CCACTGACCT CGACGTACTG 
TTACGGCAGG TGGCCGAGCG GGATGTCGAT GCGTTCGCGG CCCTCTACGA CCGGACCCGG
TCGCGGGTGT ACGGGATGGT CACCCGGGTG CTGCGGGATC CGGGCTACAG CGAAGAGACC
ACTCAGGACA TCTACCTGCA GGTGTGGCGG TCGGCCGGCA GCTACGACCC CAAGGCCGGG
TCGCCGATGG CGTGGCTGCT GACGTTGGCG CACCGTCGCG CCGTCGACCG GGTGCGTTCG
GAGGAGGCCG CCTCGCAGCG GGAGTCCCGG TACGGCGCCG CGAGCGTCGA CCCGCCCGTC
GACCACGTCG CCGACTCGGT GATCCTGCTC GACGAACGCC GTCGCGTCGT CGACTGCATG
GGATCGCTGT CGGATCTGCA ACGCGAAGCG ATCCAGCTGG CGTATTACGA GGGACTGACG
TATGTCCAGG TCTCCGAGCG TCTGTCGGCG AATCTGGCCA CAATCAAATC GCGGATGCGC
GGCGGCATCC GCGGTCTCAA GAACTGTCTG GGCATGTCAT GA
 
Protein sequence
MTALTQPVRL PFVTTDLDVL LRQVAERDVD AFAALYDRTR SRVYGMVTRV LRDPGYSEET 
TQDIYLQVWR SAGSYDPKAG SPMAWLLTLA HRRAVDRVRS EEAASQRESR YGAASVDPPV
DHVADSVILL DERRRVVDCM GSLSDLQREA IQLAYYEGLT YVQVSERLSA NLATIKSRMR
GGIRGLKNCL GMS