Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4341 |
Symbol | |
ID | 4113171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4618109 |
End bp | 4619284 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638033487 |
Product | major facilitator transporter |
Protein accession | YP_641502 |
Protein GI | 108801305 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00631729 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGGG TGCCCACTCG GCAGCCGTGG CTCACCCGGA ATGTCCGACT GTTGTCGGCG GTGTCGTTCC TGCAGGACGC CGCCAGCGAG TTGCTCTACC CGCTGCTGCC GATCTACCTG ACCTCGGTAC TGGGTGCGCC GGCGGCGGTG GTCGGGGCGG TCGAGGGTGC CGCCGAGGGG GCGGCCTCGC TGACCAAGCT GGCCTCTGGA CCGCTGGCGG ACCGGTTCGC CAGACGGCCG CTGATCGCCA CCGGCTACGG GATGGCGGCG CTGGGCAAGG TGATCGTGGC CGCCGCCGGG ACCTGGCCTG GCGTGCTGGC CGGACGGGTC ACCGACCGGC TCGGCAAGGG TCTGCGCGGC GCCCCGCGCG ATGCGCTGCT GGTGGACGGT ATCGACCCCG ACGCACGAGG CCGGGTCTTC GGATTCCACC GTGCCATGGA CACTTTCGGC GCGGTGGTCG GGCCGCTGCT CGGGCTGGCC GGCTACGAAC TGCTCGACCA TCAGATCCCA CCGCTGCTGT GGGTGGCGGT GATTCCCGCG GTGCTGTCCG TGGCGCTGGT GTTCTGCGTG CGCGAACGGA CCAGGGCGGT GCCGGCGGTG GCGCGGCCGC CGCTGTTGTC GCGGGTCCGG GACCTCCCTC GGCGCTACTG GCGGGTGACC GCGCTGCTGG TCGGCTTCGG CGTGGTGAAC TTCCCCGACG CGCTTCTCCT GTTGCGGCTC AATGAGATCG GTTTCTCCGT CGTCGAGGTG ATCCTGGCCT ACGTCGGCTA CAACGTCGTG TACGCGGTCG CGAGTTACCC GGCCGGCGCG TTGGCCGACC GCGTCGGCAC ACCGGCCGTG TTCGCCGTCG GGTTGGGGTT CTTCGCCGTC GGTTACACCG GCCTGGGGCT GACCACCGAC ACGCTCACCG CATGGATGCT GATCGGGGTC TACGGGTTGT TCACCGCGTG CACCGACGGG GTCGGCAAGG CGTGGATCTC ATCGCTGGTC GGCGCGGACG TGCAGGCCAG CGCCCAGGGC GTGTTCCAGG GCGCAAGTGG GTTCGCGATC CTGGCGGCCG GGCTGTGGGC GGGTCTGCTG TGGGGCGCCG ACGGGACGGT GCCGCTGCTG ATCTCCGGCC TGGCGGGCGG GGTGTTCGCC GTGATCGTCG CGGTGTTCGC CGTGCGGCAC CGCTGA
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Protein sequence | MTRVPTRQPW LTRNVRLLSA VSFLQDAASE LLYPLLPIYL TSVLGAPAAV VGAVEGAAEG AASLTKLASG PLADRFARRP LIATGYGMAA LGKVIVAAAG TWPGVLAGRV TDRLGKGLRG APRDALLVDG IDPDARGRVF GFHRAMDTFG AVVGPLLGLA GYELLDHQIP PLLWVAVIPA VLSVALVFCV RERTRAVPAV ARPPLLSRVR DLPRRYWRVT ALLVGFGVVN FPDALLLLRL NEIGFSVVEV ILAYVGYNVV YAVASYPAGA LADRVGTPAV FAVGLGFFAV GYTGLGLTTD TLTAWMLIGV YGLFTACTDG VGKAWISSLV GADVQASAQG VFQGASGFAI LAAGLWAGLL WGADGTVPLL ISGLAGGVFA VIVAVFAVRH R
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