Gene Mmcs_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4340 
Symbol 
ID4113170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4616352 
End bp4618076 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content70% 
IMG OID638033486 
Productthiamine pyrophosphate enzyme-like TPP binding region 
Protein accessionYP_641501 
Protein GI108801304 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0579862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATC TGGTTGCGGA TGCATTGGTG GCCCGGCTGC GCGACTGGGG CGCCGACCGG 
GTGTTCGGAT ATGCCGGCGA CGGGGTGAAC ACCCTCCTGG GTGCGTTACA ACGTTCGGGT
GCACCGGAAT TCATCTCCAC CCGGCACGAG GAACTCGCGG CGTTCATGGC CTGCGGACAC
GCCAAGTACA CCGGCCGGGT CGGCGTGTGC ATGGCCACCC AGGGCCCCGG CGCCATCCAT
CTGCTGGCCG GCCTCTACGA CGCCAAGCTC GACAAGCGGC CCGTGGTGGC GATCGTCGGA
CAGGTGGTCT CGACCGCGCT GGGCAGCGGC TACCTGCAGG AGGTCGACCT GCACACGCTC
TTCAAAGACG TCTGCGGACA GTACGTGCAG ACGGTGTTCG CACCCGAGCA GGCGCTGATG
GCGCTCGACA ACGCGATGCG GACCGCGATC GCGACGTCGA CACCGACCTG CCTGATCATC
CCGCACGACG TGCAGCAGGC CGAGATGCCC GACGAACTCG CGCACAGCCA CGGCGTGGTG
CCCTCGGCGG CGGTCAGCGC GCCGACCCGG ATCACCGCCC CCGACGACCA GATCCGCTCG
GCCGCCGACA TACTCAACGC CGGTCGGCGG GTGGCGTTGC TCGTGGGTCG CGGCGCCGCC
GGTGCGGCCG ACGAGATCGC CCGCGTGGTC GAGACACTCG GGGCCGGGGT GACGACGTCA
CTGCTCGGCA AGCCGGTGCT CGACGAGGGG CAGCCGTGGC ACACCGGCGT GATGGGTCAC
CTCGGCACCA CCGCGAGCGC CGAGCTGATG GCGAACTGCG ACACCCTGCT GATCGTCGGC
TCCAACGATC CCTGGACGGA GTTCTACCCC GCACCCGGAC AGGCCAAGGC CGTGCAGATC
GACATCCAGC CGCGGGTCAT CGGTGCGAAG TATCCCGTCG ACGCACCCGT CGTCGGGCAA
GCGGCACAGG CACTTTCGGC TCTCTCAGCG CTGCTCGAAC CCAAACCGGA CCGGGCCTGG
CAGGAGCAGG TCCGCCAGTG GCGTGAGCAG TGGCACGCCG AGGCCGCGCG CCGGGCCGCC
GCCGAGACCT CCGACGCCAA CCCCGAGGCC GTGGTGCGGG CACTGTCAGA CCATCTGCCC
GCCGACGCGC GCGTCGCCGT CGACACCGGA TCGTCGACCT ACTGGTATGC GCGACACCTC
CGGTTGCCGC CGGGCGTACC CGCCCACCAC TCGGGCTATC TCGCGTCGAT GGGATGCGCG
CTGCCCTACG GGGTGGCCGC GAAACTCGAT GCGCCACAAC GGCCGGTGGT GGCGCTGGTC
GGTGACGGGG CGATGCAGAT GAGCGGACTG CTCGAACTCG TCACGATCGC CGACCGGTGG
CGCTCGTGGC AGGATCCGCG GTTCGTGGTG CTGGTGCTGC ACAACGCCGA CCTGACCGAG
GTGTCGTGGG AGCAGCGGGA GATGGAGGGC AACCCGCGCT TCGCCCCGTC GCAGGACGTG
CCGCGGTTCC CGTACGCCGG CTACGCCGAA CTGCTCGGAC TGCGGGGTAT CCGGGTGACC
TCGTCGCAGG AGGCCGACGA CGCCTGGGCG ACGGCGTTCT CCGCCGACCG GCCGACGGTC
ATCGAGGCGG TGGTCGACGC CGCCACCCCG CTGCTGCCAC CGCTGATGCC GGACAGCAAG
GCCGACAAGG TGCGGGCGGC GCTCGAACAG GAGGCCCGAA CGTGA
 
Protein sequence
MTDLVADALV ARLRDWGADR VFGYAGDGVN TLLGALQRSG APEFISTRHE ELAAFMACGH 
AKYTGRVGVC MATQGPGAIH LLAGLYDAKL DKRPVVAIVG QVVSTALGSG YLQEVDLHTL
FKDVCGQYVQ TVFAPEQALM ALDNAMRTAI ATSTPTCLII PHDVQQAEMP DELAHSHGVV
PSAAVSAPTR ITAPDDQIRS AADILNAGRR VALLVGRGAA GAADEIARVV ETLGAGVTTS
LLGKPVLDEG QPWHTGVMGH LGTTASAELM ANCDTLLIVG SNDPWTEFYP APGQAKAVQI
DIQPRVIGAK YPVDAPVVGQ AAQALSALSA LLEPKPDRAW QEQVRQWREQ WHAEAARRAA
AETSDANPEA VVRALSDHLP ADARVAVDTG SSTYWYARHL RLPPGVPAHH SGYLASMGCA
LPYGVAAKLD APQRPVVALV GDGAMQMSGL LELVTIADRW RSWQDPRFVV LVLHNADLTE
VSWEQREMEG NPRFAPSQDV PRFPYAGYAE LLGLRGIRVT SSQEADDAWA TAFSADRPTV
IEAVVDAATP LLPPLMPDSK ADKVRAALEQ EART