Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4295 |
Symbol | |
ID | 4113125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4561418 |
End bp | 4562908 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638033441 |
Product | integrase catalytic subunit |
Protein accession | YP_641456 |
Protein GI | 108801259 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0160339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGAGG CGGCGGTCGC TACTGGGGTT TCGCGTGACC GGTGTTATGC GATTCTGCGG GCGATCGGCC GGCCTGTCGG GCAGGCCCGT GGTCGGGGTG AGCGCGCTGA TCAGCGTGGG GTGGCCGACC TGGGTGTGGT CGTGGCCGTA TTCAAGGACA CCGGTTCGAT CCTGCAGGCG GCCACAGCGT GTGGGGTGTC GCATTCGACG GCACGCAAAC TGTTGGTCGC CGAGGGGCTG GTGACCAGCG GGAAGATCCC GTGGGGCAAG CCCGAGGCGA AACGTCGGTG CTTGGAGCTG TTCGAGCAGG GTTGGTCCAC CGGGGCAGCG GCGCGGGAGG TCGGTGTCAA CGTGCGGACC GCGCGGGACT GGCGCAAGGG GATCCGGCAC ACCAACAACA CGCGGGTTCA CCCCGATGGT CGGGTCGTGG ACTACACCGA CCAGACCGTC TACAAACAGT CGGTGAGCAA CCTGATCTGC GATGACACCG GACGGCCGGC CATCGATGAC CGGTATCTGT CGGTCCAGGA CCGAGTGGCG ATCGCCGATG GCCTCCTCGG GAAGGAGTCG TTACGGACGA TCGCCGGGCG GATCGGCAAA AACGTTTCCA CGGTGTCGCG GGAGATTCGT GCGCGCAGCA TTGATGGCCG CTATCTGCCG TATCACGCCG ATCGGGCGGC TGCCTCGGCC CGGGCTCGGC CCAAGCAGTC CAAACTGGTG GTCAACGTGG TCCTGCGGGG AGCGGTTGAA GAAGGCCTGT CGCGCAAGCT GTCACCGGAG CAGATCTCCA ATCGCCTCCG TCGGGATCAT CCCGACGACG AGAGCATGCA GGTGAGCCAC GAAACGATCT ACCAAGCCCT CTACTTCCAG GCCCGCGGTG GCCTCAAAAA GGAAGTGCAG CAAGCACTTC GAACCGGGCG CACCCGACGC AAACCACACC GCAAAGAAGG CGAGCGCTAT CAGCGCTTCA CCGACCCGAT GGTGATGATC AGCGACCGCC CAGCCGAGGT GGACGACCGT GCGGTTCCCG GGCATTGGGA AGGGGATTTG ATCACCGGGG AGAAGAACCA GACCGCGATC GGCACTCTGG TCGAGCGATC GACGCGCTAC ACCATGCTGG TGCACCTGCC AGGCGGGCAC GACGCCGAAT CGGTACGGGA TGCGCTAATT GCGACTATCA GCACTCTTCC GGCGCATCTG CGTGGCTCAC TGACTTGGGA CCAAGGCTGC GAGATGGCAG GGCACAAGCA GTTCACGATG GCCACCGATA TGGCCGTGTA CTTCTGCGAT CCGGCCAGTC CCTGGCAGCG CGGCAGCAAC GAGAACACCA ACGGCCTGCT GCGCCAGTAC TTCCCCAAAG GCACCGACCT GAGCATCTAC GGACCCGAGG ACCTCGAACA CGTCGCCCAG GAACTCAACG GCCGCCCACG CAAAACGCTC GGCTGGGATA CCCCAGCCGA GCGCCTGCGT GATCTACTAC TGACCAATTA A
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Protein sequence | MKEAAVATGV SRDRCYAILR AIGRPVGQAR GRGERADQRG VADLGVVVAV FKDTGSILQA ATACGVSHST ARKLLVAEGL VTSGKIPWGK PEAKRRCLEL FEQGWSTGAA AREVGVNVRT ARDWRKGIRH TNNTRVHPDG RVVDYTDQTV YKQSVSNLIC DDTGRPAIDD RYLSVQDRVA IADGLLGKES LRTIAGRIGK NVSTVSREIR ARSIDGRYLP YHADRAAASA RARPKQSKLV VNVVLRGAVE EGLSRKLSPE QISNRLRRDH PDDESMQVSH ETIYQALYFQ ARGGLKKEVQ QALRTGRTRR KPHRKEGERY QRFTDPMVMI SDRPAEVDDR AVPGHWEGDL ITGEKNQTAI GTLVERSTRY TMLVHLPGGH DAESVRDALI ATISTLPAHL RGSLTWDQGC EMAGHKQFTM ATDMAVYFCD PASPWQRGSN ENTNGLLRQY FPKGTDLSIY GPEDLEHVAQ ELNGRPRKTL GWDTPAERLR DLLLTN
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