Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4283 |
Symbol | |
ID | 4113113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4550731 |
End bp | 4551555 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638033428 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_641444 |
Protein GI | 108801247 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGGC CGCCGCTGAA CAAGGACACC CGGCTGTGCA TCTCGCTGGC CGGGCGTCCC AGCAACATCG GCACCCGGTT CCACAACCAC CTCTACGAGG TCCTCGGGTT GGACTTCCTC TACAAGGCGT TCACCACCAC CGACATCGGC GCGGCCATCG GCGGCGTACG GGCGCTGGGC ATCCGCGGGT GTTCGGTGTC GATGCCGTTC AAACAGGACG TACTCGACCT CGTCGACGAG GTCGAGCCGT CCGCACGAAT CATCAACGCC GTCAATACGA TTGTGAACGA CGACGGGCAT CTCACCGCGT CGAACACCGA TTACCTGGCC GTGCAACGCC TCATCGACCA GTACGGCCTG GATTCCGGTT GCTCGGTGAT GGTCCAGGGC AGCGGAGGCA TGGCGTCCGC GGTCGGCGCG GCCTTCCGCG ACCGCGGCTT CGCGACGGGG ACGGTGGTGG CGCGCAATGA AACCACCGGG CGCGCCCTGG CCGAACGCCT CGGCTACGAC TACGCCGCCC AGGTCGCATC GCGGTCCGCC GAGGTGATCG TCAACGTCAC GCCCATCGGG ATGGCCGGCG GTCCCGAAGA GCGGCAGCAG GCGTTCGACG CCGACACGAT CGCGCAGGCG CACACCGTAT TCGACGTCGT CGCGACGCCC GCCGAGACGC CGCTGATCAC CGCCGCGCGC CAGGCAGGGG TCGCGGTGAT CACCGGTGCG GAGGTGGTGG CATTGCAGGC CGCGGAGCAG TTCGAGCGCT ACACCGGGGT GCGGCCGACG CCGGAGCAGG TCGCCGAGGC GTCGGCGATA TCCCGCCGGG ACTGA
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Protein sequence | MGRPPLNKDT RLCISLAGRP SNIGTRFHNH LYEVLGLDFL YKAFTTTDIG AAIGGVRALG IRGCSVSMPF KQDVLDLVDE VEPSARIINA VNTIVNDDGH LTASNTDYLA VQRLIDQYGL DSGCSVMVQG SGGMASAVGA AFRDRGFATG TVVARNETTG RALAERLGYD YAAQVASRSA EVIVNVTPIG MAGGPEERQQ AFDADTIAQA HTVFDVVATP AETPLITAAR QAGVAVITGA EVVALQAAEQ FERYTGVRPT PEQVAEASAI SRRD
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