| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4266 |
|---|
| Symbol | |
|---|
| ID | 4113096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 4532285 |
|---|
| End bp | 4533832 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638033411 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_641427 |
|---|
| Protein GI | 108801230 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.345625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGC CGTTCTACAT CACCACCGCG ATCGCCTACC CCAACGGCGA TCCGCACGTC
GGCCACGCCT ACGAGTACAT CGCCACCGAT GCGATCGCCC GCTTCAAGCG GCTCGACGGA
TATGACGTGC GCTACCTGAC CGGCACCGAC GTGCACGGGC AGAAGATGGC CGAGACGGCG
ACGGCGCTCG GTGTGCCCGT GGCCGACCTC GCACGGCGCA ACTCCGATGT TTTCCAGCGG
CTGCAGGAGA AGCTCAACAT CTCCTTCGAC CGGTTCATCC GAACCTCGGA CACCGACCAC
TACCGGGCGT CGGAGGACAT CTGGCAGCGG ATGAACGCCG CCGGCGACAT CTATCTCGAC
GCCTACTCCG GCTGGTACTC GGTGCGCGAC GAACGGTTCT TCACCGAGGG TGAGACGACG
CTGCGCGAAG ACGGGGTTCG TATCGCCACC GAAACCGGCG CCCCGCTGAC GTGGACCGAG
GAGCAGACCT ACTTCTTCAA GCTGTCGGCC TACACCGACC GACTGCTCGC CCACTACGAG
GCCCATCCCG AGTTCATCCA GCCCGACGCC CGGCGCAACG AGATCGTCAG CTTCGTCTCC
GGGGGGCTGC GCGATCTGTC GATCTCCCGC ACCACGTTCG ACTGGGGGGT GCCGGTCCCC
GACCACCCCG ACCACGTCAT GTACGTGTGG GTGGACGCGC TGACCAACTA CCTCACCGGG
GTGGGCTATC CGGACACCTC GTCGGAGGAG TTCCAGCGGT ACTGGCCCGC CGATCTGCAC
ATGATCGGCA AGGACATCAT CCGGTTCCAC ACCGTCTACT GGCCCGCATT CCTGATGTCG
GCGGGACTCG AGTTGCCGCG CAAGGTCTTC GCGCACGGCT GGCTGCTCAA CCGCGGCGAG
AAGATGAGCA AGTCGATCGG CAACGTCGTC GACCCGGTGA ACCTCGTCGA CACCTTCGGC
CTCGACCAGG TGCGCTACTT CTTCCTGCGC GAGGTGCCGT TCGGCCAGGA CGGCAGCTAC
AGCGAGGACG CCATCATCGG CCGCATCAAC GCCGACCTGG CCAACGAGCT GGGCAACCTG
GCGCAGCGCT CGCTGTCGAT GGTGGCCAAG AACCTCGGCA GTGCGGTCCC CGAACCCGGC
GAGTTCACCG CCGAGGACCT CGCGCTGCTC GACGCCGCCG ACGCGCTGAT GGACCGGGTC
CGCCGCCATT TCGACGAGCA GGCGATGCAT CTGGCGCTGG AGGCGATCTG GTCGGTGCTC
GGCGCGGCCA ACCGGTACTT CTCCGCGCAG GAGCCGTGGG TGCTGCGCAA ATCGGAGGCC
GTCCACGATC AGGTGCGGTT CCGCACCGTG CTCTACACGA CACTCGAGAC CGTGCGGATC
GCGGCGTTGC TGAGCCAGCC CGTCATGCCG GATTCGACCG CGACACTGCT CGACCTGGTC
GGCCAACCCG CCGACCAGCG CACCTTCGCC GCCGTTTCGA CCCGCCTCAC CCCGGGCACC
GCACTGCCGA AGCCCGTCGG GGTGTTTCCC AGATACCAGG TGGATTAG
|
|---|
| Protein sequence | MSQPFYITTA IAYPNGDPHV GHAYEYIATD AIARFKRLDG YDVRYLTGTD VHGQKMAETA
TALGVPVADL ARRNSDVFQR LQEKLNISFD RFIRTSDTDH YRASEDIWQR MNAAGDIYLD
AYSGWYSVRD ERFFTEGETT LREDGVRIAT ETGAPLTWTE EQTYFFKLSA YTDRLLAHYE
AHPEFIQPDA RRNEIVSFVS GGLRDLSISR TTFDWGVPVP DHPDHVMYVW VDALTNYLTG
VGYPDTSSEE FQRYWPADLH MIGKDIIRFH TVYWPAFLMS AGLELPRKVF AHGWLLNRGE
KMSKSIGNVV DPVNLVDTFG LDQVRYFFLR EVPFGQDGSY SEDAIIGRIN ADLANELGNL
AQRSLSMVAK NLGSAVPEPG EFTAEDLALL DAADALMDRV RRHFDEQAMH LALEAIWSVL
GAANRYFSAQ EPWVLRKSEA VHDQVRFRTV LYTTLETVRI AALLSQPVMP DSTATLLDLV
GQPADQRTFA AVSTRLTPGT ALPKPVGVFP RYQVD
|
|---|
| |