| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4073 |
|---|
| Symbol | |
|---|
| ID | 4112903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4341708 |
|---|
| End bp | 4342856 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638033216 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_641234 |
|---|
| Protein GI | 108801037 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.158916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACG TGCGAGTCCT GGTCACCGGC GCCACGGGAT ATGTGGGATC CCGCCTGGTC
AGCGCCCTGG TCGACGTCGG CGCCGACGTA GTGGTCGCGA GCCGGACCCC CGACCGGTTG
CGCTCCTTTG GGTGGTACGA CGATGTGACC TCGGTCGCAC TCGATGCCCA GCAACCCCAG
TCGGTCAAGC AGGCGCTCGC CGACGCGGGA CCCGTCGACG TCATCTACTA CCTGGTGCAC
GCGATCGGTC AACCGGACTT CCGCGACACC GACAACCGCG CCGCCACCAA CGTCGCCGAA
GCCGCCCGGG AGGCCGGTGT CAAACGGATC GTCTACCTCG GCGGCTTCGT CCCCACCGAC
GAGACGCTCT CCGAGCATCT GGCCGGGCGT GCCGAGGTCG CCGAGGCGCT CACCGTCCCG
GGCGGTCCCG ACGTCGTGTG GCTGGGGGCG GCGATCATCA TCGGCGCGGG GTCCACGTCG
TTCGAGATGC TGCGCTACGT CGCCGACCGC TTCCTGGTGC TGCCCATGCC CAAGTGGGCG
GCCCACCCGA TCGACCCGAT CTCGATCCGC GACGCCCTGC ACTACCTGGT GGCGGCCGCT
GACATCGACA AGGTGCCCGC GGGCGCCTAC GACATCCACG GCCCGGACAC CACCACCTAC
GGGGAGCTGC TGCAGAAGTA CGCCCGGCTG GCCGGCAGGT GGCGCGCCCC GCTGCCCGTG
CGCGGCATCG ACACGTCGGT GGTCGCGCAG CTGAGTGGGC TGGTGCTGCC TGTGCCCGGG
GGGCTGGCCG GCGACCTCAT CGAGAGCCTC GACCACCCGA TGACCGCGTC AAAGGAGGGG
CTGCGCGACT TCGTCGAGGA TCCGGCGGGC GGGTTGACCG GAATCGACGA GGCGATCCGG
CGTTCCCTGT CCCCGCAGCG CCCGCGACCG GTCAACCGGC TGGTCGACGT GCACCACCTC
GCCGACACCG ATCCGGACTG GGCCGGCGGC GACTACGAAC GCATCACGCG GCTGGTGCGG
ACCGTCACCC CGCCCATCGC CCGGCCGGCG CTCGGACTGC TCTGTCTGGT CCCCGGACCG
GTGGCGGCCG CGATGCGCAC CGGCCTGGAC ACCCTCGTCA ACCTGGTACC GAAAGGGAAT
TCGGCATGA
|
|---|
| Protein sequence | MKNVRVLVTG ATGYVGSRLV SALVDVGADV VVASRTPDRL RSFGWYDDVT SVALDAQQPQ
SVKQALADAG PVDVIYYLVH AIGQPDFRDT DNRAATNVAE AAREAGVKRI VYLGGFVPTD
ETLSEHLAGR AEVAEALTVP GGPDVVWLGA AIIIGAGSTS FEMLRYVADR FLVLPMPKWA
AHPIDPISIR DALHYLVAAA DIDKVPAGAY DIHGPDTTTY GELLQKYARL AGRWRAPLPV
RGIDTSVVAQ LSGLVLPVPG GLAGDLIESL DHPMTASKEG LRDFVEDPAG GLTGIDEAIR
RSLSPQRPRP VNRLVDVHHL ADTDPDWAGG DYERITRLVR TVTPPIARPA LGLLCLVPGP
VAAAMRTGLD TLVNLVPKGN SA
|
|---|
| |