| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4072 |
|---|
| Symbol | |
|---|
| ID | 4112902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4339483 |
|---|
| End bp | 4341711 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638033215 |
|---|
| Product | abortive infection protein |
|---|
| Protein accession | YP_641233 |
|---|
| Protein GI | 108801036 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CCGACCGATC GTCACCGACC CCCGCGCCGT GCGACGAACG GACCGGTTTT
CTCCGGGAGG CACGCGGCGT CGTGATGAGC GTCGCCGCCC CGGCCGGTGA GTGGCCGGCG
GTGATCCGTC GTCGCCGGAT CATCGTCGCG ATCTTCGTCG TGATCGGCTT CGGTCTGCTC
GGCTACTCGC TGTCGATCCC GCCGGGGGAC CCCGACTTCT ACTGGTTCAC CGCGGGACTC
GCCGTCTTCT GGACCGCGGG CGCGTTCCTC TCCGGCCCAC TTCACCTGGG CCGAATCTGT
TATCGGAGTC GCAACCAGCG GCCGGTGATC ACCGGCACCG TCGTCGGGTT GGCGCTCGGC
GGTGCGTTCG TGGTGGCGGC CCTGGTGGCC CGGGAGATCC CTTTGATGGC CGAGTACGCC
GTGCGGGTGC TCGAACACGC CAACCAGGGG GCGCTGTGGT TGGTCGTCGT GATCACCGTG
GTCAACGGCC TGGCCGAGGA GCTGTTCTTC CGCGGCGCGC TGTACACCTC ACTGGGCAAC
CGCTGGAACG GGTGGTGGGC GGTGCTCTGG TCGACGGCGG TGTACGTCGT GGTGACGGGT
GTGAGCACGC AGAACTTCAT GCTGGCCATC GCGGCGATCG TGCTCGGCAC CGTGTGCGCG
CTCGAACGCC GTGCGACGGG GGAGTGCTCG CACCCATGCT CACCCACTTC TTCTGGGGCC
TGGTCATGGT GCTCGCACTG CCCCCGATCT TCGGGGTCTG ACCCCTCAAC CGAGGGGATG
GGCGATTTCG TCGCGCGGCA TCCGCGCTGC CGTCACCGCA ACCGCGGCGA GCAGCACCGG
CGCGATACCC GCGACCATGA AGATGGTCTC CATCGACACG ACCTTCGACA GCGGGCCGAC
GATCGCGAAC GAAACCGGCA TGAACGCCAG CGAGACGAAG AAGTCCAGAC TGGAGACCCG
GCCGAGCATG TCGGTCGGCA CCCGGCGCTG CAGCAGCGTC CCCCAGATCA CCATGCCGGC
ACCGTCGGTC ACCCCGATCG CGAAGGTGGC CGCGGCCATC ACCGGGAACG ACGACGTCGT
CCCGACGACG ACGAGCGGGA TCGAGCCCGC CCCCCACATC GTCATCATGA CGGTGAGGTA
GCGCCGCGGC ATCCGCACCG ACGAGACGGC AAGGGCGCCA AGCGCACTGC CGACGCCGAA
GAACGCGAGG ATGAATCCGT AGGCGCGTGC GCCGTCGGCG AAGCGCTGCT GGGCGATGAA
CGGCAGCAGC ACCTCGATCG GTCCGAGCAC GACGAGGACG AACATGCTGG CGAACAGCAG
CGTCGACAGC AGCCACGGGG TGCGGAGCAT GAACCGGAAA CCGTCGCGCA GGTCGTGCAG
GACACGTGTG CTCGCGGCCT TCGGCCTGGC GTGCGCCGGG CGCGTCGCGA CCAACAGGAG
CAGGCCGAGC CCGAACAGGG CGGCGACCAC GAGTGCCCCG ACCGAGGGCA GCGTGGCGCC
GACCACCATG CCGGCGACCG CGGGTCCCAC CGACCGCTGG AACACCGGCC GCACCACACC
CTCGACGCCG TTGGCGGCGA GCAGCGCTTC GGCGGGCAGG ATGCGCGGGA GGATCGCGCT
GTAGGCGGGG AAGAAGAACG CGGCGGCGAT GCCGAGGACC CCGGCGGCGA CGGCCAGATG
CCAAATGCGA AGGGCGTCAA TCAATCCCAG TGTGGCGACG ATGCCGACGG TCAGGAAGTT
CACCGCTTCG ACGACGATGA TGATGGCGCG CTGGCTGAAG CGGTCGGCGG CCAGCCCGCC
GACGAGGACG AACGCCACCA AGCCGGCGCC GAGGCAGGTG GCGACCAGCG ACAGCGCGGC
GGGGTCGTTG TCGAGGGCGA TGACCTGCAG CGCCATCACG ACCGTCCACA TGCCCTCGGC
GAAGATCGAC AGCGAGACCG CCGCCATCAA CAGCCGGTAC TCGCGGACGG CGAACGGGGC
GAGCACGCGC CATCGACCGG CGCCACGCGC TGGCTTCTGG TCGAGGGTCG GCGTACTCAT
CTCTCGATGG TCGTCGACGG AGTCGGCCTC AGTCCAACGA TTTTCGGGTC AGAAGAGGTC
GTCGAGGGAC GGCAGCCTGC CGGCGAGTTT GGTGATCGCC CACTGGTTCA GCGACACGCC
CTGTTCGGCT GCTTCGACCG AGAGACGGCT GTGCAGATCC GGCGAGGCGC TCGGCGACGC
TGTCGCTGA
|
|---|
| Protein sequence | MTETDRSSPT PAPCDERTGF LREARGVVMS VAAPAGEWPA VIRRRRIIVA IFVVIGFGLL
GYSLSIPPGD PDFYWFTAGL AVFWTAGAFL SGPLHLGRIC YRSRNQRPVI TGTVVGLALG
GAFVVAALVA REIPLMAEYA VRVLEHANQG ALWLVVVITV VNGLAEELFF RGALYTSLGN
RWNGWWAVLW STAVYVVVTG VSTQNFMLAI AAIVLGTVCA LERRATGECS HPCSPTSSGA
WSWCSHCPRS SGSDPSTEGM GDFVARHPRC RHRNRGEQHR RDTRDHEDGL HRHDLRQRAD
DRERNRHERQ RDEEVQTGDP AEHVGRHPAL QQRPPDHHAG TVGHPDREGG RGHHRERRRR
PDDDERDRAR PPHRHHDGEV APRHPHRRDG KGAKRTADAE EREDESVGAC AVGEALLGDE
RQQHLDRSEH DEDEHAGEQQ RRQQPRGAEH EPETVAQVVQ DTCARGLRPG VRRARRDQQE
QAEPEQGGDH ECPDRGQRGA DHHAGDRGSH RPLEHRPHHT LDAVGGEQRF GGQDAREDRA
VGGEEERGGD AEDPGGDGQM PNAKGVNQSQ CGDDADGQEV HRFDDDDDGA LAEAVGGQPA
DEDERHQAGA EAGGDQRQRG GVVVEGDDLQ RHHDRPHALG EDRQRDRRHQ QPVLADGERG
EHAPSTGATR WLLVEGRRTH LSMVVDGVGL SPTIFGSEEV VEGRQPAGEF GDRPLVQRHA
LFGCFDRETA VQIRRGARRR CR
|
|---|
| |