Gene Mmcs_4069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4069 
Symbol 
ID4112899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4337183 
End bp4338274 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID638033212 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_641230 
Protein GI108801033 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGAC CACTGCAGGG ACTGCGTGTC GTGGAATTGG CCGGTATCGG TCCTGGTCCG 
CACGCGGCGA TGATCCTCGG CGACCTGGGT GCGGACGTCG TCCGCATCGA GCGCCCCGGC
AAGGGACCCG GTATCCCGAC GAAGGGCAGC GACCAACTGC TCCGTAACCG TCGATCGGTC
GGCGCCAACC TCAAGACCGA CGAGGGCCGC GAGCTGGTGC TGCGGCTGAT CGCCAAGGCC
GACGTGCTCA TCGAGGGCTT CCGCCCCGGT GTCACCGAGC GCCTCGGACT GGGCCCGGAG
GATTGCGCGA AGGTCAACGA ACGCCTGATC TACGGCCGGA TGACGGGCTG GGGTCAGACG
GGTCCGCGCA GTCAGCAGGC CGGTCACGAC ATCAACTACA TCTCGCTCAA CGGTGTGCTG
CACGCCGTCG GCCGCGCCGG CGAGCGGCCG GTGCCGCCGC TGAACCTCGC GGGCGACTTC
GGCGGTGGGT CCATGTTCCT GCTCGTCGGC ATCCTCGCCG CGCTGTGGGA GCGGGAACGC
TCCGGTAAGG GTCAGGTCGT CGATGCGGCC ATGGTCGACG GCTCCAGCGT GCTCGCGCAG
ATGATGTGGG CGTTCCGCGC GATGGGCATG TGGTCCGACG AGCGCGGCGT CAACATGCTC
GACACCGGTG CGCCCTACTA CGACACCTAT GAGACCTCCG ACGGCCGCTA CGTCGCGGTC
GGCGCGATCG AACCGCAGTT CTACGCCGAG ATGCTCGACA AACTCGGCCT CGATCCGGCC
GGACTGCCCG ACCAGAACGA CATGAGCCGC TGGCCCGAAC TTCGCGCCGT GCTCACCAAG
GCGTTCGCCG AACACGACCG CGACCACTGG GCGAAGGTGT TCACCGGCAG CGACGCGTGC
GTCACGCCGG TGCTGTCCTT CGGCGAGGTG GAAGCCGAAC CGCACAACAC CGAACGCGAC
ACCTTCTACC GCGAGGGCGA CTTCCTGTTC CCGGCGCCCG CGCCGCGGTT CTCCCGGACC
ACGACAACGA CGCCGACGCC GCCCGGCGTG CCCGGCGCCG ACACCGAAGC GGTCCTCAAC
GACTGGGTCT GA
 
Protein sequence
MAGPLQGLRV VELAGIGPGP HAAMILGDLG ADVVRIERPG KGPGIPTKGS DQLLRNRRSV 
GANLKTDEGR ELVLRLIAKA DVLIEGFRPG VTERLGLGPE DCAKVNERLI YGRMTGWGQT
GPRSQQAGHD INYISLNGVL HAVGRAGERP VPPLNLAGDF GGGSMFLLVG ILAALWERER
SGKGQVVDAA MVDGSSVLAQ MMWAFRAMGM WSDERGVNML DTGAPYYDTY ETSDGRYVAV
GAIEPQFYAE MLDKLGLDPA GLPDQNDMSR WPELRAVLTK AFAEHDRDHW AKVFTGSDAC
VTPVLSFGEV EAEPHNTERD TFYREGDFLF PAPAPRFSRT TTTTPTPPGV PGADTEAVLN
DWV