Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3989 |
Symbol | |
ID | 4112819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4254793 |
End bp | 4256124 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638033132 |
Product | hypothetical protein |
Protein accession | YP_641150 |
Protein GI | 108800953 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0846215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGCGG CCCGGCGCCG CGCGGGAAAG GCACTACGCA AGCCTGCCGC CGGGGTCTTC ATCCTCGCGC CGCTCGTGCT GGCCGGGGCT GTCGGCGCGA CGTCACCGGC GTTGCAGCAT TCGGTCAGCA ACGCCGCGGT CACGCCGCTG GCGGCCGTCG AGACGTCGCC GCGCAACTCC GCGGGTCCGT CGGTCGTGGC GGTCAAGAAG TCGCCGAGCG CCTTCCGCAT CGCCGCGTCC ACCGTGTCCT CGCCGCCCCC GGCCGTGGTG GTCAACTCCC CCGGCAGCCT GAAGATCCCC GCGATGGCGC TGAGCGCCTA CCGCAACGCC GAGCGGATGA TGGCCGCCGC CGTCCCCAAC TGCGGGGTGA GCTGGAACCT GCTGGCCGGT ATCGGCCGCA TCGAGTCCGG ACACGCCTCC GGCGGTGCGA CGGATTCCCG CGGTACCGCG GTCACCCCGA TCTACGGACC CGCCCTCGAC GGCACCCTGG CCGGCAACGA GGTCATCGAA CTCAGCCGCA GCGCCAACCG GGTGACCTAC GCCAGGGCGA TGGGGCCGAT GCAGTTCCTG CCCGGTACGT GGGCGCGCTA CGCCTCCGAC GGTGACGGCG ACGGCAGGGC CGACGTGCAG AACCTCTACG ACTCGACGCT GGCCGCCGCG CGTTATCTGT GCAGCGGCGG GCTGAACCTG CGCGATCCGT CGCAGGTGAT GTCGGCGATC CTGCGGTACA ACAACTCGGT CGCCTACGCG CGCAACGTGC TCAGCTGGGC GGGCGGCTAC GCGACCGGGG TCGTCCCGGT GGACCTGCCC CCGATCAACG GACCCGTTCC CGCGATGGGC GATTCCCACC TGGAGGCCAA CAAGGGCCTC GGCCCCGGCG CCCCGGTCAA CGCGACGGGC CTGCCCGCCG ACGACCCGCT GGCCCTGGTG CCGCTGCTCA GCCGCAACGA CGCCAGCCGG ATGCCCGGCA CCAACGTGCC CGGTTTCGCA CCCGGACAGC GGCTCGGCCC CCTGCCCGGC CCGGCCCCGG AGGCGCCGGC GTCCACCGCC CCGGCGCCCA CCGCGCCCGC GCCGTGGGTG CCGCCGTGGA TGGCTCCGCC CCCGGCACCG CAGCCCAGTT GCGTGGTGTT CTGTCTGGAA GACGCTCCGG CGCCGGCCGC CGCGCCCGCT CCCGGCCCGG TACCGCCTGC GGCACCGGCC CCAGGGCCCG CCCTTCCCGG ACCGCCCGCC GCACCCGCGC CGGGTCCCGT CCCGCCGCCC GCTCCCGCCG CGCCGGCAGC TCCCCTGCCG GGTCCGGCAC CGACCGGTCC CGCGCCGGGT CCGCTGGCCT GA
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Protein sequence | MAAARRRAGK ALRKPAAGVF ILAPLVLAGA VGATSPALQH SVSNAAVTPL AAVETSPRNS AGPSVVAVKK SPSAFRIAAS TVSSPPPAVV VNSPGSLKIP AMALSAYRNA ERMMAAAVPN CGVSWNLLAG IGRIESGHAS GGATDSRGTA VTPIYGPALD GTLAGNEVIE LSRSANRVTY ARAMGPMQFL PGTWARYASD GDGDGRADVQ NLYDSTLAAA RYLCSGGLNL RDPSQVMSAI LRYNNSVAYA RNVLSWAGGY ATGVVPVDLP PINGPVPAMG DSHLEANKGL GPGAPVNATG LPADDPLALV PLLSRNDASR MPGTNVPGFA PGQRLGPLPG PAPEAPASTA PAPTAPAPWV PPWMAPPPAP QPSCVVFCLE DAPAPAAAPA PGPVPPAAPA PGPALPGPPA APAPGPVPPP APAAPAAPLP GPAPTGPAPG PLA
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