Gene Mmcs_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3959 
Symbol 
ID4112789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4218205 
End bp4218852 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID638033102 
ProductHxlR family transcriptional regulator 
Protein accessionYP_641120 
Protein GI108800923 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCT CCTACGGCCA ACACTGCGCG CTGGCCAAGA GTCTCGACCT GGTCGGTGAC 
CGGTGGACGC TGTTGATCGT GCGCGAGTTG CTCGACCGGC CACGGCGTTA CGGGGACCTG
CTGAACAGCC TCACGCCGAT CGCCACCGAC ATGCTCGCCG GGCGGCTGCG CGATCTCGAG
CGCAACGGGC TGGTGGTCAA ACGCGAACTC CCCAAACCGG GGTCGGGAAA CGTCTACGAC
CTCACCGACG ACGGACGCGC GCTCGAGGAC GTCATCAACG CGTTCGTGCG GTGGGGCAGG
CATCTGCTGT TCACGCGGAC CCCGACGGAT CTGGTGCGCC CCGAATGGCT GGCGCGCGCG
GTGCGCGCCT ATGTGCGTGA CGACCGGACC GGACCCGATC TGGTGCTGCG CCTGGCGACG
CCGCAGGGCG GGGCGACCAT CCTGATCGGC ACCCGGCGGG TGGAGTTGGT CGGCGATGAG
GTCGCCCCGG ATGTGGTGCT GACCGGTGAG GTGGATGTGC TGGCCGCCGC CACCGACCCC
GCCCGCGTCG ACGAACTGGT CGCGGCGGGC AGGTTGCACG TCGCCGGCGC CCCCGAAGCG
GTTCGACAAC TCGCCGAGGT GTTCACCCCG CCCCGGGTTC GCCTCTGA
 
Protein sequence
MSRSYGQHCA LAKSLDLVGD RWTLLIVREL LDRPRRYGDL LNSLTPIATD MLAGRLRDLE 
RNGLVVKREL PKPGSGNVYD LTDDGRALED VINAFVRWGR HLLFTRTPTD LVRPEWLARA
VRAYVRDDRT GPDLVLRLAT PQGGATILIG TRRVELVGDE VAPDVVLTGE VDVLAAATDP
ARVDELVAAG RLHVAGAPEA VRQLAEVFTP PRVRL