Gene Mmcs_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3956 
Symbol 
ID4112786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4215020 
End bp4216069 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content72% 
IMG OID638033099 
Productluciferase-like protein 
Protein accessionYP_641117 
Protein GI108800920 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03558] luciferase family oxidoreductase, group 1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTTT CTGTCCTGGA CCTCATCCCC GTGCGCACCG ACCAGACCAC GTCGGATGCG 
CTGGCGGCGA CCACCCGACT CGCACAGACC GCCGACCGGC TGGGTTACAC GCGCTACTGG
ATCGCCGAGC ACCACAACAT GCCCGCCGTC GCGGCGACCA GCCCACCGGT CGTGATCGCC
CACCTCGCCG CGCAGACGTC GCAGGTGCGG TTCGGTTCCG GCGGCGTGAT GCTGCCCAAC
CACGCCCCGC TGGCCGTCGC CGAGCAGTTC GCCCTGCTCG AGGCCGCCCA TCCCGGCCGC
ATCGACCTCG GGATCGGCCG GGCCCCCGGA TCGGATCCGG TGACGTCGAT GGCCCTGCGC
GGCGCCGCCG GCCGCGACGA CACCGACATC GAACGTTTCC CCGACTACCT CGACGACGTC
GCGGCGCTGA TGAGCCGCCA TGGGGTGCGG GTCTCGTTGC CGCGCAACCT GATGCGCGAG
AACTACATCC TCAAGGCCAC CCCCGCGGCG ACCACCGAAC CGCGGCTGTG GCTGCTCGGT
TCGTCGATGT ACTCCGCGCG TCTGGCCGCG GCCAAGGGGC TGCCGTACGT GTTCGCCCAC
CACTTCTCCG GGCAGGGCAC CGCCGAGGCG TTGGCGACCT ACCGGTCGGA GTTCCGGCCC
AGCGACGTCG CCGCCGAACC GGTCACGTTC CTGACCGTCA ACGCCGTCGT GGCCGAGACG
CACGACGAGG CGATGGCGCT GATGCTGCCG AACCTGCACA TGATGGCCCA GCTGCGCACC
GGTCAGCCGC TGACCGCGCT CGACCTCGTG GAGGAAGCGC AGGCCAAGGA GCTCAGCCCG
CAGGCCCAGG CCGTCGTCCG GCACGGACTG CAGCGCGCCG TCGTCGGGTC GCCGACCGAG
GCGGCCGATC AGGTGCGAGC GTTGGCCGCC GAGTTCGACG TCGACGAGGT GATGATCAAC
CCGGTCGCCT CGGCGCGCCG CGGCACCGAC CCGGCGACGG CGCCGGCCCG CGACACCACG
CTGGAACTGC TCGCCAAGGA GCTGTTCTAG
 
Protein sequence
MRLSVLDLIP VRTDQTTSDA LAATTRLAQT ADRLGYTRYW IAEHHNMPAV AATSPPVVIA 
HLAAQTSQVR FGSGGVMLPN HAPLAVAEQF ALLEAAHPGR IDLGIGRAPG SDPVTSMALR
GAAGRDDTDI ERFPDYLDDV AALMSRHGVR VSLPRNLMRE NYILKATPAA TTEPRLWLLG
SSMYSARLAA AKGLPYVFAH HFSGQGTAEA LATYRSEFRP SDVAAEPVTF LTVNAVVAET
HDEAMALMLP NLHMMAQLRT GQPLTALDLV EEAQAKELSP QAQAVVRHGL QRAVVGSPTE
AADQVRALAA EFDVDEVMIN PVASARRGTD PATAPARDTT LELLAKELF