| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3922 |
|---|
| Symbol | |
|---|
| ID | 4112752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4176267 |
|---|
| End bp | 4178135 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638033065 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_641083 |
|---|
| Protein GI | 108800886 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.394279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGA CCACCGAGGC ACCACCGGCG GCGGCGCCCG CCACCTCCGG AGGCCGCGCG
CGCTGGGAGC GGCTGGCGCT GCTCACCCTG CTCGCCGCCA CCGCCGTGCT CTACCTGTGG
GGGCTGGGCT CCTCGGGCTG GGCCAACGAA TACTACGCCG CGGCCGTGCA GGCCGGCACC
CAGAACTGGA CGGCCTGGCT GTTCGGGTCG CTGGACCCCG GCAACTCCAT CACCGTCGAC
AAGCCACCGG CTTCGCTCTG GCTGATGGTG TTGTCCGCCA GGTTGTTCGG GTTCAGCGCG
TTTGCGATGC TGTTACCGCA GGCGCTGATG GGTGTGGCGA CGGTGGCGGT GCTGTTCGCC
GCGGTGCGAC GGGTCAGCGG TGCGGGCGCC GGGATGGTCG CCGGTGCGGT GATGGCTACG
ATGCCGGTGG CGGCGTTGAT GTTCCGCTTC AACAATCCCG ACGCGCTGCT GGTGCTGCTG
CTCGTCGTCG CCGCGTACTG CATGGTGCGG GCGATCGAGA CCGCGAGTAC GCGCTGGATG
GTCCTCGTCG GCTGCGCGTT GGGGTTCGCG TTCCTCACCA AGATGCTGCA GGCCTTCCTC
GTGATGCCCG GTCTGGCGCT GGCGTTCCTG GTGGCGGCGC CGGTGGCGTT GTGGCGGCGG
ATCGGCACGC TCGCCGTCGG CGCGGTGTCG ATGGTGGTGT CGGCGGGATG GTTCATCGCT
CTGGTCGAGG TGTGGCCGGC GTCGTCGCGT CCCTACATCG GCGGTTCGAC CGACAACAGC
CTGCTGCAGT TGGCCCTGGG CTACAACGGC ATCCAGCGAA TCGCCGGTGG CGGGGGACCG
GGCGGCGGGC CCGGCGGCGG TCCGGGGGAC GGACCGGGTC GCGGCGCGAA TCTGTTCTTC
GGCGGTGAGC CTGGGATCGG ACGCCTGTTC GGGCATTCGA TGGGTGTCGA GGCCTCGTGG
CTCCTGCCCG CGGCGCTGAT CGGCCTGGCC GCCGGCATCT GGTTCACCCG CCGCGCCGTG
CGCACCGACG CGGTACGCGC GAGCCTGCTG CTGTGGGGCG GGTGGCTGCT GGTCACCGGC
GTCGTGTTCA GTTTCATGGA CGGCACGATC CACCCGTACT ACACGGTGGC GCTGTCGCCC
GCGGTGGCCG CGCTGGTCGG CATCGCGGTC GTGGAGTGCT GGCGCGGCAG GCGCTACCTT
CAGCCCCGCC TCGCGCTGGC CGCGATGATG GCGGCGACGG GCGTCTGGGC GTTCGTGTTG
CTCGTCCGCA CCCCGGACTG GCTGCCGTGG CTGCGCTGGG TGGTGCTCGC GCTCGCGATT
TTGGTCGCGG CGATCCTGGT GGTCGGTGCG CACCGGCTGA AGCGGGCCGC GACAGCCGTC
GTCGTCGCCG CGGCGCTGGC CGGCCTCGCC GCGCCCACCG CCTTCGCGGT CTACAACGTG
GCGCACCCCG CGAGTGGTCC CGGCACCATG TCCGGTCCCG CACGCGGCGA CGCCTTCGGA
GGAATGCCAC CGGGAGGCCC CCGCGGCGAC CGGGACGACG CCGCCGTGGC GGAGCTGGTC
CGAGGTGTCG ACAGCCGTTG GGCGGCAGCC AGTGTCGGGT CGATGGGATC GGCGGGTCTG
CAGTTGGACT CCGGGGCCTC GATCATGGCG ATCGGCGGGT TCACCGGCTC GGACGCCTCG
CCGACACTCG CGCAGTTCCA GCAGTACGTC GCCGACGGTG ATGTCCGGTA TTTCATCGGC
AGTGACAGGG GTGGTCCACC CGGCTTCGGG CGCGACGGCA CCGCCGCGGA GATCACCGCG
TGGGTGCAGG AGAACTTCAC CCCCGTTCAG GTTGGTGGAG CGACCGTCTA CGACCTGCAA
TCCGGCTGA
|
|---|
| Protein sequence | MTVTTEAPPA AAPATSGGRA RWERLALLTL LAATAVLYLW GLGSSGWANE YYAAAVQAGT
QNWTAWLFGS LDPGNSITVD KPPASLWLMV LSARLFGFSA FAMLLPQALM GVATVAVLFA
AVRRVSGAGA GMVAGAVMAT MPVAALMFRF NNPDALLVLL LVVAAYCMVR AIETASTRWM
VLVGCALGFA FLTKMLQAFL VMPGLALAFL VAAPVALWRR IGTLAVGAVS MVVSAGWFIA
LVEVWPASSR PYIGGSTDNS LLQLALGYNG IQRIAGGGGP GGGPGGGPGD GPGRGANLFF
GGEPGIGRLF GHSMGVEASW LLPAALIGLA AGIWFTRRAV RTDAVRASLL LWGGWLLVTG
VVFSFMDGTI HPYYTVALSP AVAALVGIAV VECWRGRRYL QPRLALAAMM AATGVWAFVL
LVRTPDWLPW LRWVVLALAI LVAAILVVGA HRLKRAATAV VVAAALAGLA APTAFAVYNV
AHPASGPGTM SGPARGDAFG GMPPGGPRGD RDDAAVAELV RGVDSRWAAA SVGSMGSAGL
QLDSGASIMA IGGFTGSDAS PTLAQFQQYV ADGDVRYFIG SDRGGPPGFG RDGTAAEITA
WVQENFTPVQ VGGATVYDLQ SG
|
|---|
| |