| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3897 |
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| Symbol | |
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| ID | 4112727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 4149800 |
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| End bp | 4151224 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638033039 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_641058 |
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| Protein GI | 108800861 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.468676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCCC ACCCCGCCGG CCCCCGGCAC GCCGAGGAGA TCCACCACGG CGGCGCGCCA
CCGCGTCCCG CCGGACCCGA CGAGGTCCTG CGGCTGGCCC CGAATGTGTG GCCGCGCAAC
GCCGTTCGCG GCGCCGACGG TGTCGTGTCG ATCGCCGGGG TGCCCGTCAC CGACATCGCG
GCCCAGTTCG GCACGCCGGT TTTCATCATC GACGAGGCCG ACTTCCGCTC GCGCTGCCGG
GAGATCTCCG CCGCGTTCGG TGGCGGCGAG TACGTGCGCT ACGCCGCAAA GGCTTTCCTG
TGCACCGAGG TGGCGCGCTG GATCGACGAG GAGGGGCTCG CCCTCGACGT CGCCAGTGGC
GGAGAACTCG CGGTCGCGTT GCACGCCGGC TTCCCGGCCG AGCGGATCGC GTTGCACGGC
AACAACAAAT CGCCGGACGA ACTGGCGCTG GCCGTGAAGT CCGGCGTGGG CCACGTGGTG
GTCGACTCGA TGATCGAGAT CGAACGCCTC GACGAGATCG CCGCCGCGGC GGGCGTGGTC
CAGGACGTGC TGGTGCGGGT GACCGTCGGC GTCGAAGCCC ATACGCACGA GTTCATCTCG
ACCGCGCACG AGGACCAGAA GTTCGGGCTC TCGCTGGCCA GCGGGGCCGC GATGGCCGCC
GTGCGCCGCG TGTTCGAGAC CGACAACCTG CGGTTGGTCG GCCTGCACAG CCACATCGGC
TCGCAGATCT TCGACGTCGC GGGGTTCGAG CTCGCCGCGC ACCGCGTGAT CGGCCTGCTG
CGCGATGTCG TCGCCGAATT CGGGGTGGAC AAGACCGCCC AGATGTCCAC CGTCGACCTC
GGTGGTGGCC TCGGCATCTC CTATCTGCCG CAGGACGATC CGCCGCCGGT CGCCGACCTC
GCCGCCAAGC TGAGCGCCAT CGTGCGCGAG GAGTCGGCAG CCGTCGGGCT GCCCACCCCG
AAACTCGTGG TCGAGCCGGG CCGGGCGATC GCCGGGCCGG GCACGATCAC GCTCTACGAG
GTCGGCACCG TCAAGGACGT GGCCGTGGCG TCGGACAGGT ACCGCCGCTA CGTCAGCGTC
GACGGCGGGA TGAGCGACAA CATCCGCACC TCGCTCTACG GCGCCGAATA CGACGTCCGG
TTGGTCTCCC GGGTCAGCGA CGCCGACCCC GCACTGAGCC GCGTGGTCGG AAAGCACTGC
GAGAGCGGCG ACATCGTGGT CCGGGACGCC TGGCTCTCCG GTGATGTGGC ACCGGGCGAT
CTGCTCGGGG TGGCCGCGAC CGGCGCCTAC TGCTATTCGA TGTCGAGCCG TTACAACCTG
ATCGGCCGCC CCGCGGTGGT GGCGGTGCGC GACGGGCACG CGCGCCTGAT CCTGCGCCGC
GAGACGGTCG ACGATCTGTT GAGTCTGGAA GTGAGTGGTC AATGA
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| Protein sequence | MNAHPAGPRH AEEIHHGGAP PRPAGPDEVL RLAPNVWPRN AVRGADGVVS IAGVPVTDIA
AQFGTPVFII DEADFRSRCR EISAAFGGGE YVRYAAKAFL CTEVARWIDE EGLALDVASG
GELAVALHAG FPAERIALHG NNKSPDELAL AVKSGVGHVV VDSMIEIERL DEIAAAAGVV
QDVLVRVTVG VEAHTHEFIS TAHEDQKFGL SLASGAAMAA VRRVFETDNL RLVGLHSHIG
SQIFDVAGFE LAAHRVIGLL RDVVAEFGVD KTAQMSTVDL GGGLGISYLP QDDPPPVADL
AAKLSAIVRE ESAAVGLPTP KLVVEPGRAI AGPGTITLYE VGTVKDVAVA SDRYRRYVSV
DGGMSDNIRT SLYGAEYDVR LVSRVSDADP ALSRVVGKHC ESGDIVVRDA WLSGDVAPGD
LLGVAATGAY CYSMSSRYNL IGRPAVVAVR DGHARLILRR ETVDDLLSLE VSGQ
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