Gene Mmcs_3892 details

Gene Information

• Locus tag: Mmcs_3892
• ID: 4112722
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 4143499
• End bp: 4144095
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638033034
• Product: TetR family transcriptional regulator
• Protein accession: YP_641053
• Protein GI: 108800856
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCCCG CGCAGTCCGT GCGTGACCGC TTGATGGATG CGGCGGAATC CTGCTTGCGC 
GCCAAGGGGA TTCGGGCCAC GACAGTGTCG GAGGTCGCGG AGGTCGCCGG GGTGTCCCGC 
GGCTGGCTCT ACCGGCACTT CCCCGACAAG GTGTCCCTGC TCGGCGCGGC GATCGTGCGG 
CTCAACGAGG CCTACTGGTC CGAGGCGCAC GCCGTTCTCG AGCCCATCGA CGGGCTGGCC 
GAGCAGATCG TGGCGGGCAT CCGGCACGGA CGGCTGGCCT ACGACGACCC CGGTGCCCTG 
CTGATGAAGC TGCGCCTCGA AGAACCCGAG GAGTTCGCGG CCTGCGCAGG CGCCGGCGTG 
CAGGGGCTGG TCCCCGACCT CGCCGCCTTC TGGAGCCGCT ACCTGCTGGC CGCCCGCGAG 
CGGGGTGAGA TCCATCCGGC CACCGATATC GCCGAGGCGT CGGAGTGGGT GGCGCGTTCG 
GTGATCTCGC TGGCGACGGT GCCGGGCAAC ACGCTCGATC CCGCCGACCC GGCGGCCCTG 
CTCACCCACA TCCGCAGGTA TGTGATGCCG GGGTTGACGG CCGATCCCGC GGTCTGA 

 

Protein sequence

MTPAQSVRDR LMDAAESCLR AKGIRATTVS EVAEVAGVSR GWLYRHFPDK VSLLGAAIVR 
LNEAYWSEAH AVLEPIDGLA EQIVAGIRHG RLAYDDPGAL LMKLRLEEPE EFAACAGAGV 
QGLVPDLAAF WSRYLLAARE RGEIHPATDI AEASEWVARS VISLATVPGN TLDPADPAAL 
LTHIRRYVMP GLTADPAV