Gene Mmcs_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3888 
SymbolrpmE 
ID4112718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4140327 
End bp4140572 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content62% 
IMG OID638033030 
Product50S ribosomal protein L31 
Protein accessionYP_641049 
Protein GI108800852 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGG GTATTCACCC TGACTACGTC GAGACCACGG TCCAGTGCGG CTGTGGCAAC 
ACGTTCACCA CACGCAGCAC CAAGAAGACC GGCAACATCG TCGTCGAGGT CTGCTCGCAG
TGCCACCCGT TCTACACCGG CAAGCAGAAG ATCCTCGACA GCGGCGGCCG CGTCGCGCGC
TTCGAGAAGC GCTACGGCAA GCGTGGCGCC AACAAGGCTG CCAACACGGA CTCTGCCGAC
AAGTAG
 
Protein sequence
MKTGIHPDYV ETTVQCGCGN TFTTRSTKKT GNIVVEVCSQ CHPFYTGKQK ILDSGGRVAR 
FEKRYGKRGA NKAANTDSAD K