| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3880 |
|---|
| Symbol | |
|---|
| ID | 4112710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4134083 |
|---|
| End bp | 4134592 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638033022 |
|---|
| Product | F0F1 ATP synthase subunit B |
|---|
| Protein accession | YP_641041 |
|---|
| Protein GI | 108800844 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0711] F0F1-type ATP synthase, subunit b |
|---|
| TIGRFAM ID | [TIGR01144] ATP synthase, F0 subunit b |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.147131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACC TGAGCACGAC CATCTTGGCC GCGGAAGAAG GCGGGGGCGG TAACTTCCTC
GTCCCCAACG GCACCTTCTT CTTCGTGCTG CTCATCTTCC TGATCGTGTT GGGCGTCATC
GCCAAGTGGG TGGTGCCCCC GATCAGCAAG GTGCTGCAAG AGCGCGAAGC AATGGTCACC
AAGACGGTTG AGGACAACCG CAAGGCGGCC GATCTGTTCG CCGCCGCACA GGGCGACTCC
CAGCAGGTGA TGGCCAAGGC GCGTCGTGAG GCCTCGGGCA TCCGGGACGA GGCCCGCGGC
GAGGGTCGCA AGATCCTCGA GGACATGCGA TCCCGCGCCA GCGCGGAGTC GGCGGCCACT
CTGCAGAAGA CCAACGAAGA GCTGTCCCGT CAGGGCCAGC AGACCGCGGC CGAACTGCAG
TCGTCGATCG AGACGTTGTC GGCCACCCTG GCCAGCCGCG TTCTCGGGGT CGACATCTCC
AGCGCCGCCG CGACGAGCCA GGGACGGTAG
|
|---|
| Protein sequence | MGDLSTTILA AEEGGGGNFL VPNGTFFFVL LIFLIVLGVI AKWVVPPISK VLQEREAMVT
KTVEDNRKAA DLFAAAQGDS QQVMAKARRE ASGIRDEARG EGRKILEDMR SRASAESAAT
LQKTNEELSR QGQQTAAELQ SSIETLSATL ASRVLGVDIS SAAATSQGR
|
|---|
| |