| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3876 |
|---|
| Symbol | |
|---|
| ID | 4112706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4128539 |
|---|
| End bp | 4130068 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638033018 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_641037 |
|---|
| Protein GI | 108800840 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.493152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTG CCACCGAACA AAAAGAGAAG ACCGGCACCG ACAACGTCGG CCGCGTCGTG
CGGGTCACCG GGCCTGTCGT CGACGTCGAG TTCCCGCGCG GGTCCGTGCC GGAGCTGTTC
AACGCACTGC ACGCGGAGAT CTCCTACAAG GACCTCGCCA AGACGCTGAC CCTCGAGGTC
GCCCAGCACC TCGGCGACAG CCTGGTGCGC TGCATCTCGA TGCAGCCGAC CGACGGCCTG
GTTCGCGGCG TCGACGTCAC CGACACCGGC GCCTCGATCT CGGTGCCCGT CGGCGAGGGC
GTCAAGGGCC ACGTGTTCAA CGCCCTGGGT GCCTGCCTCG ACGACCCCGG CTACGGCAAG
GACTTCGAGA AGTGGTCCAT CCACCGCAAG CCGCCGGCCT TCGACGAGCT CGAGCCGCGT
ACCGAGATGC TCGAGACCGG CCTCAAGGTC GTCGACCTGC TCACCCCCTA CGTCCGCGGC
GGCAAGATCG CCCTGTTCGG TGGCGCCGGT GTGGGCAAGA CCGTGCTCAT CCAGGAGATG
ATCAACCGCA TCGCCCGCAA CTTCGGCGGC ACCTCGGTGT TCGCCGGTGT GGGTGAGCGC
ACCCGTGAGG GCAACGACCT GTGGGTCGAG CTCGCCGACG CGAACGTGCT CAAGGACACC
GCCCTGGTGT TCGGCCAGAT GGACGAGCCG CCCGGCACGC GTATGCGCGT CGCCCTGTCG
GCGCTGACCA TGGCGGAGTA CTTCCGCGAC GAGAAGCAGC AGGACGTGCT GCTGTTCATC
GACAACATCT TCCGGTTCAC CCAGGCCGGT TCGGAGGTCT CCACGCTGCT CGGCCGTATG
CCGTCGGCGG TGGGCTACCA GCCGACCCTG GCCGACGAGA TGGGTGAGCT CCAGGAACGC
ATCACCTCGA CGCGTGGTCG CTCCATCACC TCGATGCAGG CCGTGTACGT GCCCGCCGAC
GACTACACCG ACCCGGCCCC GGCCACCACG TTCGCGCACC TCGACGCGAC GACGGAGCTG
AGCCGTTCGG TGTTCTCCAA GGGCATCTTC CCGGCGGTGG ACCCGCTGGC CTCCAGCTCG
ACCATCCTCG ACCCGTCGGT CGTCGGTGAC GAGCACTACC GTGTCGCCCA GGAAGTCATC
CGGATCCTGC AGCGCTACAA GGACCTTCAG GACATCATCG CCATCCTCGG TATCGACGAA
CTCGCCGAGG AGGACAAGCA GCTCGTCCAG CGCGCGCGTC GTATCGAGCG CTTCCTGAGC
CAGAACATGA TGGCGGCCGA GCAGTTCACC GGTCAGCCCG GCTCGACGGT GCCGCTCAAG
GAGACCATCG AGGCGTTCGA CAAGCTCAGC AAGGGCGATT TCGACCACCT GCCCGAGCAG
GCGTTCTTCC TCATCGGTGG CCTCGAGGAT CTGCAGCGCA AGGCCGAGAG CCTCGGCGCC
AAGATGGAGG ACACCTCCGG CGACGGCGCC CCGGCCCAGA GCGATTCCAA GAGCGACTCC
AAGGGTGACG ACGCAGACAA GGACGCCTGA
|
|---|
| Protein sequence | MTAATEQKEK TGTDNVGRVV RVTGPVVDVE FPRGSVPELF NALHAEISYK DLAKTLTLEV
AQHLGDSLVR CISMQPTDGL VRGVDVTDTG ASISVPVGEG VKGHVFNALG ACLDDPGYGK
DFEKWSIHRK PPAFDELEPR TEMLETGLKV VDLLTPYVRG GKIALFGGAG VGKTVLIQEM
INRIARNFGG TSVFAGVGER TREGNDLWVE LADANVLKDT ALVFGQMDEP PGTRMRVALS
ALTMAEYFRD EKQQDVLLFI DNIFRFTQAG SEVSTLLGRM PSAVGYQPTL ADEMGELQER
ITSTRGRSIT SMQAVYVPAD DYTDPAPATT FAHLDATTEL SRSVFSKGIF PAVDPLASSS
TILDPSVVGD EHYRVAQEVI RILQRYKDLQ DIIAILGIDE LAEEDKQLVQ RARRIERFLS
QNMMAAEQFT GQPGSTVPLK ETIEAFDKLS KGDFDHLPEQ AFFLIGGLED LQRKAESLGA
KMEDTSGDGA PAQSDSKSDS KGDDADKDA
|
|---|
| |