Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3860 |
Symbol | |
ID | 4112690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4105991 |
End bp | 4108078 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638032999 |
Product | alpha amylase, catalytic region |
Protein accession | YP_641021 |
Protein GI | 108800824 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGGCC GTATCGGAAT CGATGACGTC GCGCCCGTGG TATCCGGCGG CAGGTATCCG GCCAAAGCGG TGGTGGGTGA GGTGGTGCCG GTGAGCGCCA CGGTGTGGCG CGAGGGCCAC GAAGCCGTCT CCGCGACGCT GGTGGTGCGC TATCACGGCA CGTCCTATCC CGAACTCGCC GACGCTCCGG TCGGCCGGGT GAGCACCACC GAGGCCGTGC CGATCGACGA GGTCGTCAGC CCTTCGCCGC GGAAGAAGCC GCAGGCGCTG CCGATGAGCC TGGGCCGCAC CCCCGATGTC TTCCACGGGC ACTTCGTACC GGACGCGGTC GGGTTGTGGA CCTACCGTGT CGACGGGTGG GGCGATCCGA TCGCCAGCTG GCGCCACAAC GTGATCGCCA AACTCGACGC CGGCCAGAGC GAGTCCGAAC TGGACAACGA TCTGCTCGTG GGCGCGCGGC TGCTGGAGCG GGCCGCCACC GGTGTCCCCC GTCAGGACCG CTACCCGCTG GCGCAGGCCG TCGAACGACT GCGCGAACCC GGCGATCCGT TCTACCGGGC GGGGGCGGCG CTGGCGGCCG ACGTCACCGC ACTGCTCGAC CAGTATCCGC TGCGCGAATT GGTCACCCGC GGTGAGCAAT ACGGCGTCTG GGTGGACCGC CCGCTGGCCC GCTTCGGCTC CTGGTACGAG TTCTTCCCCC GCTCCACCGG CGGCTGGGAC AGCCAGGGCC ACCCCGTGCA CGGCACGTTC GCCACCGCCA CCAAGGCGCT GCCCCGGGTC GCCCGGATGG GCTTCGACGT GGTCTACCTC CCGCCGATCC ACCCGATCGG CAAGGTGCAC CGCAAGGGCC CGAACAACAG CGTGACCGCG GGCCCGAACG ACGTGGGGTC ACCGTGGGCG ATCGGCAGCG ACGAGGGCGG CCACGACGCC GTGCACCCGG AGTTGGGCAC CATCGAGGAC TTCGACGACT TCGTCGCCGC GGCCCGTGAC GAAGGCCTCG AGGTGGCGCT GGACCTGGCG CTGCAGTGTG CGCCGGACCA TCCGTGGGCG CGCGAGCATC CGGAGTGGTT CACCGTGCTG CCCGACGGCA CCATCGCCTA CGCGGAGAAC CCGCCGAAGA AGTACCAGGA CATCTATCCA CTGAACTTCG ACAACGACCC GACGGGGTTG TACATGGAGG TGCTGCGGGT GGTCCGGTTC TGGATCTCCC ACGGCGTCAA GGTCTTTCGC GTGGACAACC CACACACCAA ACCGCCCAAC TTCTGGGCGT GGCTGATCGG GGAGATCAAG AACGAGGACC CCGACGTGCT GTTCCTGGCC GAGGCGTTCA CCCGGCCGGC CCGCCTGTAC GGGCTGGCGA AACTCGGCTA CACGCAGTCG TACACGTACT TCACCTGGCG GACGTCGAAA CACGAGTTGA CCGAGTTCGG CAGGCAGATC GCCGAACACG CCGACTATGC GCGGCCCAAC CTGTTCGTCA ACACCCCCGA CATCCTGCAC GAGAGCCTCC AGCACGGCGG CCCCGGCATG TTCGCGATCC GCGCGGTGCT GGCGTCCACG ATGAGTTCGG TGTGGGGGGT CTACTCCGGT TACGAACTGT TCGAACACCG ACCGGTGCGG GAAGGCAGCG AGGAGTACCT CAACTCCGAG AAGTACGAAC TGCGTCCGCG CGACTTCGAC GCCGCCCTGG CCGACGGGGA GTCACTGGAA CCGTTCATCA CCCGGCTCAA CGAGATTCGG CGGGTGCATC CGGCGCTGCA CGAACTGCGG ACCATCACGT TCCACTACCC CGACAACGAC GCCGTCCTGG CCTACAGCAA GTTCGACCCG GCCACCGGTG ACCAGGTCCT CGTCGTAGTC ACGCTCAACC CGTTCGGGCC CGAAGAGGCC ACAGTGTGGT TGGACATGCC CGCATTGGGA ATGGAGCCAT ACGACAGGTT CTGGGTCCGC GACGAGATCA CCGGAGAGGA ATACCAGTGG GGGCAGTCGA ACTACGTGCG CATCGAACCG GCGAAGGCGG TCGCGCACGT GCTCAACATG CCCCAGGTGC CCGCCGACCA ACGCCTCAAC CTACTGCGTA GGGAGTGA
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Protein sequence | MAGRIGIDDV APVVSGGRYP AKAVVGEVVP VSATVWREGH EAVSATLVVR YHGTSYPELA DAPVGRVSTT EAVPIDEVVS PSPRKKPQAL PMSLGRTPDV FHGHFVPDAV GLWTYRVDGW GDPIASWRHN VIAKLDAGQS ESELDNDLLV GARLLERAAT GVPRQDRYPL AQAVERLREP GDPFYRAGAA LAADVTALLD QYPLRELVTR GEQYGVWVDR PLARFGSWYE FFPRSTGGWD SQGHPVHGTF ATATKALPRV ARMGFDVVYL PPIHPIGKVH RKGPNNSVTA GPNDVGSPWA IGSDEGGHDA VHPELGTIED FDDFVAAARD EGLEVALDLA LQCAPDHPWA REHPEWFTVL PDGTIAYAEN PPKKYQDIYP LNFDNDPTGL YMEVLRVVRF WISHGVKVFR VDNPHTKPPN FWAWLIGEIK NEDPDVLFLA EAFTRPARLY GLAKLGYTQS YTYFTWRTSK HELTEFGRQI AEHADYARPN LFVNTPDILH ESLQHGGPGM FAIRAVLAST MSSVWGVYSG YELFEHRPVR EGSEEYLNSE KYELRPRDFD AALADGESLE PFITRLNEIR RVHPALHELR TITFHYPDND AVLAYSKFDP ATGDQVLVVV TLNPFGPEEA TVWLDMPALG MEPYDRFWVR DEITGEEYQW GQSNYVRIEP AKAVAHVLNM PQVPADQRLN LLRRE
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