Gene Mmcs_3842 details

Gene Information

• Locus tag: Mmcs_3842
• ID: 4112672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 4087311
• End bp: 4089242
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638032981
• Product: major facilitator transporter
• Protein accession: YP_641003
• Protein GI: 108800806
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.632161
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTCGGC ACGGTGTGGA GACGTCAGCG GCGGATGCGG CGGCGGTGGC CGCCCGGGTC 
CGCCCGAACG TGCTCGTCGC CGTCCTCGCG GCCGCAGGCA TCAGCGTGTC GCTGATGCAG 
ACGCTGATCA TCCCGCTGAT CCCGGAACTG CCGACCCTGT TGCGGACCGG TCCGGCCAAC 
GCATCCTGGG CCATCACCGC GACACTGCTC ACCGCGGCCG TCGCGACGCC GCTGTTCGGC 
CGGCTCGGCG ACATCTACGG ACCCAAACCC GTGCTGATGA CCTGTGCGGC GCTGCTGACG 
GCGGGTTCGG TGATCGCGGC GGTCAGCACC TCGCTCGTCC CGGTGATCGT CGGCCGCGGG 
CTGCAAGGAT TCGGGATGCC GATCATCCCG CTGGGGATCA GCGTGCTGCG CGCGGCGGTC 
CCCGCCGACC GGGTGGGTTC GGCGATGGGC ATCATGAGCG CCTCGCTCGG GGTGGGTGGT 
GCCCTGGGCC TGCCGTTGTC GGCGGTGATC GCGCAGAACT TCAACTGGCA CGTGCTGTTT 
TGGTTCGCCG CCGGGCTCGG CGCGGCGGCC CTGATCTGCT TCGCCGTCCT GGTCCCGCCG 
GTCGGATCGC GAACCTCGGA ACGGGTGGAC CTGCTCGGTG CGGTCGGTCT GGCGGGCGGC 
CTGACCACGC TGCTGCTGGC GATCTCCAAG GGGCAGACCT GGGGGTGGAC CAGCACGACG 
ACGGTGAGCC TGTTCGCTGC CTCACCCGTC ATCTTCGCGG TCTTCGCCTG GTGGCAGCTG 
CGTGCGCCCG CACCGATCGT CGACCTGCGC ACCACGGTCC GTCGGCCGGT GCTGACGACG 
AACCTCGCAT CGGTGGGCGT GGGCTTCGGC CTGTTCGCGT TGTCGCTCGT CGCACCGCAG 
GTGCTCGAAC TGCCGACGCA GACCGGGTAC GGGCTCGGGC AGTCGATGCT GCACGCAGGT 
CTGTGGATGG CGCCCGGCGG GCTGGCGATG ATGGTGTCCG CACCGATCGC CGCGCGGATC 
GCGGCGGTCA CCGGACCCCG GCTCACCCTC GTCATCGGAT GCGCGATCAT CTCGGTGTCC 
TACCTGGCCG GCCTCCAACT CCTGGACAGT CCCGTGGAGG TGCTGATCCT CAATGTCGCG 
GTCAGCGTCG GGGTCGGATT CGCATTCGCC TCGTTGCCCG CCCTGATCAA CGCGGCGGTT 
CCGATCGCGG AGACCGCCGC TGCCAACGGC ATCAACGCCC TGGCCCGGTC CCTGGGAACC 
TCGGTTTCCA GCGCCGTGAT GGGCGCGGTG CTGGCCGGGA TGACCACGTC GTTCGCCGGC 
CGGGTGCTCC CGTCGCTGGA GGGGTTCCAC ACCGCGCTGA TCATCGCCGC CTGCGCGGCG 
GGCGTGGCGG GGCTGATCGC GCTGGCCATC CCGAAACCCG CTCCCGCGAT CGCGCAGGTG 
CACTCCGAAC CGGGTCCCCC CGTGCACGAT CTCGAGGCGG TGCTGACGCG ACTGGGCCGG 
CATTCCGCAC TGGGCACTTA CGCCGACGGC ACGTCGACGC CGTTCCTCGG GCGCCGGACC 
TACGTGCTGC TGACCCATCT CGAGGAGGCC GGGCCCGCAT CGGTCGAGGA GATCGCCGAC 
GCGCTGGGCG TCGATGCCGC GACGGTGGGC AGTGAGGCGT TCGTCATGCT ACGCGACGGT 
CTCGTCGCAC CGGTGGCGCA GGACAGCCCA CCCGCGTGGT CGGGGCGCAC GCCACGCTTC 
GCGCTCACCG TGGGAGGCCG GGATCGCCTG CGGCGGCAGC GGTCTCACAA GGTGGCGGGG 
TTGCGCCGCG CGGTCGACGG CTGGGACCAC GCCGACGTCG AGGCGTTGGT CGGTTACGTC 
ACTCGGCTGA GCGACGACAT CGACGGTGCC CGCCGGGGCG TCCGGCCGGT CACAGGCCGA 
AGCGCGCCTT GA 

 

Protein sequence

MARHGVETSA ADAAAVAARV RPNVLVAVLA AAGISVSLMQ TLIIPLIPEL PTLLRTGPAN 
ASWAITATLL TAAVATPLFG RLGDIYGPKP VLMTCAALLT AGSVIAAVST SLVPVIVGRG 
LQGFGMPIIP LGISVLRAAV PADRVGSAMG IMSASLGVGG ALGLPLSAVI AQNFNWHVLF 
WFAAGLGAAA LICFAVLVPP VGSRTSERVD LLGAVGLAGG LTTLLLAISK GQTWGWTSTT 
TVSLFAASPV IFAVFAWWQL RAPAPIVDLR TTVRRPVLTT NLASVGVGFG LFALSLVAPQ 
VLELPTQTGY GLGQSMLHAG LWMAPGGLAM MVSAPIAARI AAVTGPRLTL VIGCAIISVS 
YLAGLQLLDS PVEVLILNVA VSVGVGFAFA SLPALINAAV PIAETAAANG INALARSLGT 
SVSSAVMGAV LAGMTTSFAG RVLPSLEGFH TALIIAACAA GVAGLIALAI PKPAPAIAQV 
HSEPGPPVHD LEAVLTRLGR HSALGTYADG TSTPFLGRRT YVLLTHLEEA GPASVEEIAD 
ALGVDAATVG SEAFVMLRDG LVAPVAQDSP PAWSGRTPRF ALTVGGRDRL RRQRSHKVAG 
LRRAVDGWDH ADVEALVGYV TRLSDDIDGA RRGVRPVTGR SAP