Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3836 |
Symbol | |
ID | 4112666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4083384 |
End bp | 4084721 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638032974 |
Product | general substrate transporter |
Protein accession | YP_640997 |
Protein GI | 108800800 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0813841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTCTCG CCATGGAGAG TCAGACATCC GCGCCTGCAC CCGCCGAGAC GGCGGCCATC CGCAAAGCGG TCGCAGGCGC GTCGATCGGT AACGCCGTCG AATGGTTCGA CTTCGCCATC TACGGCTTCC TCGCCACTTT CATCGCCGCC AAGTTCTTCC CGGCGGGCAA CGACACGGCC GCCCTGCTGA ACACGTTCGC GATCTTCGCC GCGGCCTTCT TCATGCGGCC CCTCGGCGGT TTCGTCTTCG GCCCGCTCGG CGACCGGATC GGACGTCAGC GGGTGCTCGC GGTGGTCATC CTGCTGATGT CGGCGGCCAC GCTCGGCATC GGCCTGCTGC CGACCTACGC CAGCATCGGC GTCGCCGCAC CGCTGCTGCT GCTGTTCCTG CGGTGCCTGC AGGGGTTCTC CGCGGGCGGT GAATACGGTG GCGGCGCAGT CTATCTCGCC GAGTACGCCC GTGACCGCAA CCGCGGGTTG ACGGTCACGT TCATCGCCTG GTCCGGTGTC GTCGGCTTCC TGCTCGGCTC GGTGACGGTG ACGGTGCTGC AGGCGCTGTT GCCCACCGCG GCGATGGACA GCTACGGCTG GCGGATCCCG TTCCTGATCG CCGCACCGCT GGGCCTGGTC GGCCTCTACA TCCGGTTACG CCTCGACGAC ACGCCCGAGT TCGCGGCGCT GTCGGAGACC GACCGGGTGG CGTCGTCGCC GCTGCGTGAG GCGGCCACCA CCGCGTGGCG GCCGATCCTG CAGGTGATCG GCCTGTTCAT CGTGTTCAAT GTCGGCTACT ACGTGGTGTT CACGTTCCTG CCGACCTACT TCATCAAGAC CCTCGAATTC GGCAAGACGG CGGCGTTCGT CTCGATGTCG CTGGCCAGTC TGGTCGCCCT GGTGCTGATC CTGCCGCTGG CCGCGCTGTC GGACCGCATC GGCAGGCGTC CGCTGCTGAT CGGCGGGACG GTGGCGTTCG TGATCCTCGC GTATCCGCTG TTCCTGCTGC TGAATTCCGG TTCGCTCGCC GCGGCGATCA CCGCGCACTG CGTGCTGGCG GCCATCGAGT CGATCTACGT GTCGACCGCG GTCACCGCCG GCGTCGAACT GTTCGCCACC CGGGTGCGCT ACAGCGGGTT CTCCATCGGC TACAACGTGT CGGTCGCGGC GTTCGGCGGG ACGACGCCCT ACGTCGTCAC GTGGCTGACC GCGACGACCG AGAACAACCT CGCCCCGGCG CTGTACCTGA TCGTCGCGGC CGTCGTATCG CTGGCGACGC TGCTCACCCT GCGGGAGTCC GCCGGCCGGC CGCTGGCCGC GACAGTGGCC GCTGACGTGC GACGATGA
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Protein sequence | MPLAMESQTS APAPAETAAI RKAVAGASIG NAVEWFDFAI YGFLATFIAA KFFPAGNDTA ALLNTFAIFA AAFFMRPLGG FVFGPLGDRI GRQRVLAVVI LLMSAATLGI GLLPTYASIG VAAPLLLLFL RCLQGFSAGG EYGGGAVYLA EYARDRNRGL TVTFIAWSGV VGFLLGSVTV TVLQALLPTA AMDSYGWRIP FLIAAPLGLV GLYIRLRLDD TPEFAALSET DRVASSPLRE AATTAWRPIL QVIGLFIVFN VGYYVVFTFL PTYFIKTLEF GKTAAFVSMS LASLVALVLI LPLAALSDRI GRRPLLIGGT VAFVILAYPL FLLLNSGSLA AAITAHCVLA AIESIYVSTA VTAGVELFAT RVRYSGFSIG YNVSVAAFGG TTPYVVTWLT ATTENNLAPA LYLIVAAVVS LATLLTLRES AGRPLAATVA ADVRR
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