Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3640 |
Symbol | |
ID | 4112472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 3886153 |
End bp | 3886800 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638032778 |
Product | oligoribonuclease |
Protein accession | YP_640803 |
Protein GI | 108800606 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00635145 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTGACG AACTGGTGTG GATCGACTGC GAGATGACCG GCCTGGATCT GAGGTCGGAT CTGCTCATCG AGATCGCGGT GCTGGTCACC GATGCCGACC TGAACATCCT CGGCGACGGG CTCGACGTGG TGATCCACGC GCCCGACGAG GCGCTCGACG CCATGATCCC GGTGGTGACC GAGATGCACA CCCGCTCGGG GCTGATCGAG GAGGTGCGTG CCTCCACGGT CGACCTCGCG ACGGCCGAGG AGATGGTGCT CGACTACATC CGCGGGCACG TCAAACAGGC CAAGACGGCG CCGCTGGCCG GGAACTCGAT CGCCACCGAC CGCGGGTTCA TCGCCCGCGA CATGGCCAAA CTCGACGACT ATCTGCACTA CCGAATGATC GACGTCAGCT CGATCAAGGA GTTGTGCCGC CGGTGGTATC CGCGGATCTA CTTCGGTCAG CCCGAGAAAG GTCTTGCGCA CCGCGCGCTG GCCGACATCC ACGAGTCGAT CCGCGAGCTG AAGTACTACC GGCAGACGGC GTTCGTCGCT CCGCCCGGCC CGTCGACCAG CGATATCGCC GCGATCGCCG CCGAGCTCGG CCCGCCCGGC AAGGACGCGG CGGATACCGA TTCGGCCGCA GGGCACACGA CCGGTTAA
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Protein sequence | MRDELVWIDC EMTGLDLRSD LLIEIAVLVT DADLNILGDG LDVVIHAPDE ALDAMIPVVT EMHTRSGLIE EVRASTVDLA TAEEMVLDYI RGHVKQAKTA PLAGNSIATD RGFIARDMAK LDDYLHYRMI DVSSIKELCR RWYPRIYFGQ PEKGLAHRAL ADIHESIREL KYYRQTAFVA PPGPSTSDIA AIAAELGPPG KDAADTDSAA GHTTG
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