| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3624 |
|---|
| Symbol | |
|---|
| ID | 4112456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3868819 |
|---|
| End bp | 3869973 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638032762 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_640787 |
|---|
| Protein GI | 108800590 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0815481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC AGGAGTTCCT GGTGCCGGAT CTGGGTGAGG GTCTGCAGGA CGCGACGATC
ACCTCGTGGG CGGTCGATGT CGGTGACGAG GTCGAGCTGA ACCAGACGCT GTGCACCGTC
GAGACGAACA AGGCGGAGGT CGAGATCCCC AGCCCGTACG CCGGCCGGGT GGTCGAACGC
GGGGGAGACG AGGGTCAGAC GCTCGACGTG GGATCCCTGC TGGTGCGGAT CGCGACATCA
GCGGATGAAC CGGTGCCGCA ACGCAAATCG GTACTGGTCG GATACGGCGC CGATGAGGCG
ATGGATACCA GCAGGCGCCG GTCGGCGCGG CCGCGCGCCA AACCGCCGGT GCGCAAGCTG
GCGGCCGAAC TGGACGTGGA TCTCAACGCG GTCAGCGCAT CGGGACCCGA CGGCGTGGTC
ACCCGCGAGG ACGTGCAGCG TGCGGCGGAA GGCTGGGCGC CGGCCGCGGA GCAGGTCGCG
GTGCGGGGTG TCCAGGCGGA GATGGCGCGA CGGATGTCGT TGTCGCGGAG GGAGATCCCG
GATGCCCACG CCAGCGTCAC GGTCGACGGC AGCGCACTGC TGCGGCTGCG GGACAGACTG
CTCGGCACCG ACCCGCCGGT GACGCCCTTC GTGCTGACGC TGCGACTGCT GACGCTGGCG
CTGCGGCACC AGCCGGCGCT AAACGCCACC TGGATCGAGA CGGCGGAGGG GCCGCAGATC
CACCGGCACA CTGCAGTCCA CCTCGGATTC GGTGTCGCCG CGCCGCGCGG GCTGCTGGTG
CCGGTGATCG CCGACGCGCA GGACATGACC ACGCGTGGAC TCGCGGCCGC GGTGGGGCGG
CTGGTGGCGG AGGCTCGCGC CGGACGGGTG CGGCCGGCGG AGCTGTCGGG GTCGACGTTC
ACCGTCTCGA ATTTCGGTGC GCTCGGGCTC GACGAGGGCG TGCCGGTGAT CAACCATCCG
GAGGCTGCGA TCCTGGGCAT GGGTTCGTTG AAGCCGCGCG CGGTGGTCGT CGACGGTGAG
GTGGTCGCCC GGCCGACGAT GACGTTGACG TGCGCCTTCG ACCATCGCAT CGCCGACGGG
GCCACCGTGG CGGCCTTCCT GGGCGAGTTG CGCGAGCTCG TCGAAGCGCC GGAGCTCGCG
CTGCTCGACC TGTGA
|
|---|
| Protein sequence | MTVQEFLVPD LGEGLQDATI TSWAVDVGDE VELNQTLCTV ETNKAEVEIP SPYAGRVVER
GGDEGQTLDV GSLLVRIATS ADEPVPQRKS VLVGYGADEA MDTSRRRSAR PRAKPPVRKL
AAELDVDLNA VSASGPDGVV TREDVQRAAE GWAPAAEQVA VRGVQAEMAR RMSLSRREIP
DAHASVTVDG SALLRLRDRL LGTDPPVTPF VLTLRLLTLA LRHQPALNAT WIETAEGPQI
HRHTAVHLGF GVAAPRGLLV PVIADAQDMT TRGLAAAVGR LVAEARAGRV RPAELSGSTF
TVSNFGALGL DEGVPVINHP EAAILGMGSL KPRAVVVDGE VVARPTMTLT CAFDHRIADG
ATVAAFLGEL RELVEAPELA LLDL
|
|---|
| |