Gene Mmcs_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3602 
Symbol 
ID4112434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3840388 
End bp3842196 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content67% 
IMG OID638032739 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_640765 
Protein GI108800568 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0482312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG ACAGCCAGAA GCGGCCCGGA ACCACCTCCG CGAACGTCGC CCGGATGTTC 
TTCGACCGTG TCGAGAAATC CGCGCAGTCC GAAGCCTTCC GCAAACTCGA CGACGGCAAG
TGGACGTCGC TGACGTGGCA GGACGCCGCC GGTCAGGTCG AGGCGCTGGC CGCCGGCCTG
CTCGCGTTGG GCATCGAACC CGAACAGCGG GTGGGCATCG CGTCGAGCAC CCGCTACGAC
TGGATCCTGG CCGACCTGGC GATCATGTGT GCCGGCGGTG CCACCACCAC GGTGTACCCG
ACGACGAATG CCGCCGACAC GGCCTACATC CTCGCCGACT CCGGGTCGCG CTTCGTGTTC
GCCGAAGACG ACGCGCAGCT CGCGAAGCTG CGGGACAAAC GCGACGAACT GCCGAACCTC
GAGAAGGTGG TGCTGTTCGA CGGCACCGGC GACGGCGACT GGGTGCTGAA CCTGGCCGAC
GTCGTCGACC TGGGCCGCAA ACACCTCGAG GAGCAGCCGT CGGCCGTGCG TGACCGCTCC
GCGGCGATCA CCTCCGATCA GCTGGCCACG CTGATCTACA CCTCGGGCAC CACCGGCAAA
CCCAAGGGCG TCCGGCTCGC CCACCGGGCG TGGGTGTACG AGGGGGAGAC GGTCGCCGGT
TTCGACATCC TGCACGAGGA CGATCTGCAG CTTCTGTGGC TGCCGCTGGC CCACGCGTTC
GGCAAGGTGC TGATCTCGGC GCAGCTGGCC TGCGGGTTCG CCAGCGCCAT CGACGGTCGG
GTGGACAAGA TCGTCGAGAA CATGGGGACG GTGAAGCCGA CCTTCATGGG GGCGGCGCCG
CGCATCTTCG AGAAGGCCCA CGCCAAGGTC GTCATGCAGC AGCACGGCGT CAAGGAGAAG
CTGTTCAACG CCGCGTTCGC GGTGGGCCGT CAGGTCAGCC GCCTGCGGCG TGAGGGCAAG
TCCGTGCCGC CGCATCTGGC GCTGGCGCAC ACCCTGTTCG ACCGTCTCGT CTTCAGCAAG
GTGCGTGCGG TGTTCGGCGG CCGGATCCGG TTCATGATCT CCGGCTCCGC ACCGCTCAAC
CGCGACATCG CCGAGTGGTT CCACGCGGCC GGCCTGCTGA TCCTCGAGGG TTACGGGCTC
ACCGAGACCG CCGCCGGTGC GTTCATCAAC CGGCTGGAGA ACTACCGGCT CGGCACGGTC
GGGCAGGTCT TCGACGGCAG CGAGGTGCGC ATCAGCGACG ACGGCGAGGT CCAGATCAAG
GGGCCGTGTG TGATGGACGG CTACCACAAC TTGCCGGACA AGACCGCCGA GACGCTGACC
GACGACGGAT GGCTGCGCAC CGGTGACCGT GGTCAACTCG ACGACGACGG CTTCCTCACC
ATCACCGGCC GGATCAAGGA GCTGTTCAAG ACCTCCGGCG GGAAATACGT TGCGCCACCG
GCCATCGAGG GCAGGTTCAT GGCGCTGTGC CCGTACGCGG GGCACATGCT GGTGTTCGGC
GAGTCCCGGA ACTTCTGCGT CGCGCTGGTG ACGCTGGACC CCGACGCCAT CTCCGGCTGG
GCCGCAGAAC ACGGCATGGG GGACAAGTCG TACCCCGACC TGGTGAAGTC CGATGCGGTG
CGCGAGCTGA TCGGCGGCTA CATCGAGCGG TTGAACTCGG AGCTCAACAG GTGGGAGACC
ATCAAGAAGT GGGCGATCCT CGACCACGAC CTGTCCATCG AGAACAACGA GCTGACACCG
TCGTTGAAGG TCAAGCGGGG GGTTGTCGAG GAGAAGCAGA AGGACCTGCT GGACTCGTTC
TACACGTGA
 
Protein sequence
MSIDSQKRPG TTSANVARMF FDRVEKSAQS EAFRKLDDGK WTSLTWQDAA GQVEALAAGL 
LALGIEPEQR VGIASSTRYD WILADLAIMC AGGATTTVYP TTNAADTAYI LADSGSRFVF
AEDDAQLAKL RDKRDELPNL EKVVLFDGTG DGDWVLNLAD VVDLGRKHLE EQPSAVRDRS
AAITSDQLAT LIYTSGTTGK PKGVRLAHRA WVYEGETVAG FDILHEDDLQ LLWLPLAHAF
GKVLISAQLA CGFASAIDGR VDKIVENMGT VKPTFMGAAP RIFEKAHAKV VMQQHGVKEK
LFNAAFAVGR QVSRLRREGK SVPPHLALAH TLFDRLVFSK VRAVFGGRIR FMISGSAPLN
RDIAEWFHAA GLLILEGYGL TETAAGAFIN RLENYRLGTV GQVFDGSEVR ISDDGEVQIK
GPCVMDGYHN LPDKTAETLT DDGWLRTGDR GQLDDDGFLT ITGRIKELFK TSGGKYVAPP
AIEGRFMALC PYAGHMLVFG ESRNFCVALV TLDPDAISGW AAEHGMGDKS YPDLVKSDAV
RELIGGYIER LNSELNRWET IKKWAILDHD LSIENNELTP SLKVKRGVVE EKQKDLLDSF
YT