Gene Mmcs_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3577 
Symbol 
ID4112409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3809538 
End bp3810185 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID638032712 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionYP_640740 
Protein GI108800543 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC AGACCGATCC CCGCCTCCAG CCGCAGGCGC GCTACATCCT GCCGTCGTTC 
ATCGAGCACT CGAGCTTCGG CGTCAAGGAA TCCAACCCGT ACAACAAGCT CTTCGAGGAA
CGCATCATCT TCCTCGGCGT GCAGGTGGAC GACGCGTCGG CGAACGACAT CATGGCCCAG
CTGCTGGTCC TCGAGTCGCT CGATCCCGAC CGCGACATCA CCATGTACAT CAACTCGCCC
GGTGGCTCCT TCACGAGCCT GATGGCGATC TACGACACCA TGCAGTACGT GCGCGCGGAC
ATCCAGACGG TGTGCCTGGG CCAGGCCGCC TCGGCCGCCG CGGTGCTGCT GGCCGCCGGC
ACACCCGGTA AGCGGCTCGC GCTGCCGAAC GCCCGGATCC TCATCCACCA GCCCGCGCTG
TCCGGCGTGA TCCAGGGTCA GTTCTCCGAT CTGGAGATCC AGGCCAAGGA GATCGAGCGG
ATGCGCACGC TGATGGAGGT CACCCTGGCG CGGCACACCG GCAAGGACCC CGAGACGATC
CGCAAGGACA CCGATCGCGA CAAGATCCTG ACCGCCGAAG AGGCCAAGGA CTACGGGATC
ATCGACACCG TCCTCGAGTA CCGGAAGCTG TCGGCTCAGA CGTCCTGA
 
Protein sequence
MSNQTDPRLQ PQARYILPSF IEHSSFGVKE SNPYNKLFEE RIIFLGVQVD DASANDIMAQ 
LLVLESLDPD RDITMYINSP GGSFTSLMAI YDTMQYVRAD IQTVCLGQAA SAAAVLLAAG
TPGKRLALPN ARILIHQPAL SGVIQGQFSD LEIQAKEIER MRTLMEVTLA RHTGKDPETI
RKDTDRDKIL TAEEAKDYGI IDTVLEYRKL SAQTS