Gene Mmcs_3484 details

Gene Information

• Locus tag: Mmcs_3484
• ID: 4112316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 3711473
• End bp: 3713506
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638032619
• Product: glycoside hydrolase 15-related
• Protein accession: YP_640647
• Protein GI: 108800450
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3387] Glucoamylase and related glycosyl hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.267768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGCGG GCATGGTTCT GGAACACACC GAGCCCACCG ACGGAGCCGC GACGATCGGG 
CAGCCGGCCT ATCTGCCCGA CACTCCGTTG ACGGTGACGG CGCCGGTCCC CTACGCGCCG 
ACCGGTGGGC TGCGGAACCC GTTCCCGCCC ATCGCCGACT ACGGCTTCCT GTCCGACTGC 
GAGAACACGT GCCTGATCTC CTCGGCCGGC TCCGTCGAGT GGCTGTGCGT GCCCCGCCCG 
GATTCGCCGA GCGTGTTCGG CGCGATCCTC GACCGCGGTG CAGGTCACTT CCGGCTCGGC 
CCGTACGGCG TGACGGTGCC CGCGGCGCGG CGTTACCTGC CGGGCAGCCT GATCCTCGAG 
ACCACGTGGC AGACCCACAC CGGCTGGCTG ATCGTGCGCG ACACCCTGGT GATGGGTCCC 
TGGCACGACC TCGAGGCGCG GTCGCGCACC CACCGGCGCA CGCCGATGGA CTGGGATGCC 
GAGCACATCC TGTTGCGCAC CGTGCGGTGT GTCAGCGGCA CCGTCGAGCT GGTGATGAAC 
TGTGAGCCGT CGTTCGACTA CCACCGGGTG AGCGCCGAGT GGGAGTACTC CGGCCCGGCC 
TACGGTGAGG CGATCGCGCG GGCCAACCGC AACGCCGACT CCCATCCGAC ACTGCGGCTC 
ACCACGAACC TGCGGATCGG GTTGGAGGGC CGCGAGGCCA GGGCCCGCAC CCGGCTCAAG 
GAGGGCGACA ACGTCTTCGT GGCGCTGTCC TGGTCGAAGC ATCCGGCGCC GCAGAACTAC 
GAAGAGGCCG CCGACAAGAT GTGGCAGACC AGCGAGGCGT GGCGGCAGTG GATCAACGTC 
GGCGACTTCC CCGACCACCC GTGGCGGGCG TACCTGCAGC GCAGCGCGCT CACCCTCAAG 
GGCCTGACCT ACTCCCCGAC CGGCGCGCTG TTGGCCGCGA GCACCACGTC GTTGCCGGAA 
ACACCTCAGG GCGAACGCAA TTGGGACTAC CGCTACGCGT GGGTGCGGGA TTCGACGTTC 
GCGCTGTGGG GTCTCTACAC ACTGGGCCTG GACCGCGAGG CCGACGACTT CTTCGCGTTC 
ATCGCCGACG TGTCCGGCGC CAACAACGGG GAGCGCCACC CGCTGCAGGT GATGTACGGC 
GTCGGGGGTG AGCGCAGCCT GGTCGAGGAG GAACTGCACC ACCTGTCGGG GTACGACGGC 
GCCCGCCCGG TGCGGATCGG CAACGGTGCC TACAACCAGA TGCAGCACGA CATCTGGGGC 
ACCATGCTCG ATTCGGTCTA CCTGCACACC AAGTCGCGTG AGCAGATCCC CGAGGCGTTG 
TGGCCGGTGC TCAAGCACCA GGTCGAGGAG GCCATCAAGC ACTGGAAGGA ACCCGACCGC 
GGCATCTGGG AGGTCCGCGG CGAACCGCAG CACTTCACCA GTTCGAAGGT GATGTGCTGG 
GTGGCGCTCG ACCGTGGCGC GAAGCTCGCC GAACTCGAGG GCGAGAAGAG CTACGCCCAG 
GAGTGGCGCA CCATCGCCGA GCAGATCAAG GCCGACATCC TCGCCAACGG CGTCGACTCG 
CGGGGCGTGT TCACCCAGCG TTACGGCGAC GACGCGCTGG ACGCCTCCCT GCTGCTGGTG 
CCGCTGGTCC GGTTCCTGCC GCCGGACGAC CCGCGGGTGC GGGCCACGGT GCTGGCGATC 
GCCGACGAGC TGACCGAGGA GGGTCTGGTC CTGCGCTACC GCGTCGAGGA GACCGACGAC 
GGGTTGGCCG GCGAGGAGGG CACGTTCACG ATCTGCTCGT TCTGGCTGGT GTCGGCGCTC 
GTGGAGATCG GTGAGATCAG CCGTGCCAAG CACCTGTGTG AACGGTTGTT GTCGTTCTCC 
AGTCCGCTGC ACCTCTACGC CGAGGAAATC GAACCCCGCA CCGGCCGCCA CCTGGGCAAC 
TTCCCGCAGG CGTTCACCCA CCTGGCGTTG ATCAACGCGG TCGTGCACGT CATCCGCGCC 
GAGGAGGAAG CCGACAGCTC GGGGGTCTTC GTCCCGGCCA ACGCGCCGTC GTAA 

 

Protein sequence

MMAGMVLEHT EPTDGAATIG QPAYLPDTPL TVTAPVPYAP TGGLRNPFPP IADYGFLSDC 
ENTCLISSAG SVEWLCVPRP DSPSVFGAIL DRGAGHFRLG PYGVTVPAAR RYLPGSLILE 
TTWQTHTGWL IVRDTLVMGP WHDLEARSRT HRRTPMDWDA EHILLRTVRC VSGTVELVMN 
CEPSFDYHRV SAEWEYSGPA YGEAIARANR NADSHPTLRL TTNLRIGLEG REARARTRLK 
EGDNVFVALS WSKHPAPQNY EEAADKMWQT SEAWRQWINV GDFPDHPWRA YLQRSALTLK 
GLTYSPTGAL LAASTTSLPE TPQGERNWDY RYAWVRDSTF ALWGLYTLGL DREADDFFAF 
IADVSGANNG ERHPLQVMYG VGGERSLVEE ELHHLSGYDG ARPVRIGNGA YNQMQHDIWG 
TMLDSVYLHT KSREQIPEAL WPVLKHQVEE AIKHWKEPDR GIWEVRGEPQ HFTSSKVMCW 
VALDRGAKLA ELEGEKSYAQ EWRTIAEQIK ADILANGVDS RGVFTQRYGD DALDASLLLV 
PLVRFLPPDD PRVRATVLAI ADELTEEGLV LRYRVEETDD GLAGEEGTFT ICSFWLVSAL 
VEIGEISRAK HLCERLLSFS SPLHLYAEEI EPRTGRHLGN FPQAFTHLAL INAVVHVIRA 
EEEADSSGVF VPANAPS