| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3407 |
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| Symbol | |
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| ID | 4112239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 3613581 |
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| End bp | 3617228 |
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| Gene Length | 3648 bp |
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| Protein Length | 1215 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638032540 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_640570 |
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| Protein GI | 108800373 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases)
[COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.377185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC CGGTCGTCAT CGATCCCCGC TACCACGACG CGGTGATCTT CGACCTCGAC
GGCGTGCTCA GCGACCCGGC GCCGACGGTG ACGCTGGCGC GCGAACTGCA GGACGTCGGC
GTCAAGACCG CGGCCTGTTC GTCGAACAGT CACGGCCGGG ACATGGTGAA AAGCATTGGG
GCCGAGGGTT TCGATGTGTG CGTCGACGGC TCCGCCGAAG ACCGGGCCGG CGCCCCGTGT
CTGGAGGCAG CGCGCCGACT CGGTGTGCGC CCGCAGCGCG CCGTGCTCAT CGAGGATTCG
GCCGCGGGCC GGACACCGGG CCGCGACGGT GGGTTCGCCC TCGTGATCCG GGTCGACCGG
ACCCGGCACC CCGACGAACC GATCGACGGC GATGCCGACC GGGTCGTCGC GGGTCTGGCC
GGTATCGCGG TCCGCACCGG TGACAGGCGC GTCTCCGAGG TCCCCAACGC GTTGGAGTCC
TACGGACAGC TCATCGGTAT CACCGGCGCC CGCGAGTCGG TGTTGTTCCT GGACTACGAC
GGAACCCTGT CCCCCATCGT CTCCGAACCG GACGCCGCGG TGCTGGTCGA CGGCGCGGCC
GAGGCGCTGG CGCTCGTCGC CGCGGTGTGC CCGGTCGCGA TCCTGAGCGG CCGCGACCTC
GCGGATGTCC GCACCCGCGT GGGCGCACCG GGGCTGTGGT ACGCCGGCAG CCACGGATTC
GAGCTGACCG GACCGGACGG CACCTACCAC CAGAACGAGG CGGCCGCCGC GTTCGTGCCC
GTCCTCGAAC GGGCCGCCGG GGATCTGCGC GACCTGCTGG GGCACGTTCC CGGAATCTTC
GTCGAGCACA AGCGCTTCGC CGTCGCGGTC CACTACCGGG AGGTCGGGTC CTCCGACGAG
GTCGCCGAGA TCGTCTCGAC CACACACAGA CTCGGCAGGC AGGCCGGTCT CCGGGTGACG
AGCGGCCGCA TGCTCGTCGA ACTGCGACCC GACATCGACT GGGACAAGGG CACCACCCTG
AGGTGGATCC GGGACCGCAT CGACGCGGCC GGTTCGCTGA TGCCCATCTA CATCGGTGAC
GACCTCACCG ACGAAGACGC GTTCGATGCG GTCCGCTTCG ACGGCGTCGG CATCGTCGTG
CGCCACGACG AGGACAGCGA CCGCAAGACG GCGGCCCGAT TCAGCCTGCA GTCACCCGAC
CAGGTGCGCG AATTCCTCCA ACGGGGGTCG CAGTGGCTGG CCTACAAGCA CCAGGTCGCA
AGCGAGGCCT GGGATCTCAC CTACGAGGGG TACGACCCGC AGAGCGAGAA GCTGCGCGAG
GCGTTGTGCA CCGTCGGGAA CGGTTACTTC GCCACGAGGG GCGCGGCACC GGAATCGAAG
GCCGGCCAGG TGCACTACCC CGGCACCTAC GCCGCGGGCA TCTTCAACCG CCTCGTCGAC
GACGTATCGG GTACCGCCGT CGACAACGAG AGCCTGGTGA ACCTGCCGGA CTGGCTCTCG
CTGACCTTCC GGATCGACGG CGGTGACTGG TTCGACATCG ACGAGGTCGA AGTGCTCTCC
TACCGCCAGA CTCTCGACCT GCGCGGGGCG ACGCTGACGC GGGAGGTCCG CTTTCGCGAC
GACGCCGGGC GCACCACTTC GGTTACGCAG CAACGTTTTG TCGCGATGCA CCTGCCGCAC
GTCGGCGCTC TGCAGACCAA GATCGTCGCC GAGGACTGGT CGGGCCGGAT CACGATCCGC
TCGACGCTCG ACGGGAACGT GACGAACTCG CTGGTCGAGC GGTACCGCGA CCTCGGTAAA
GAGCACCTCG AACTGATCGA GAAGCGGCAG CTCAGCGACG ATTCGGTGTT GTTGACGGTC
CGCACGACCC AGTCGGGCAT TCCGATCGCC ATGGCGGCCC GCTGCATCGT CTGGCGTGAC
GACGCCCCGG TCGGGGCGTC CTACCGACTC GTCGGGGACG GCGCCGAGAT CGGTCACGAG
ATCACCGTCG AGCAGTCGGT CGGCGAGGCG CTGACGGTGG AGAAGCTGGT CACCCTCTTC
ACCGGCCGCG ACGTCGCGAC CTCCGATCCC GCGGTGGACG CCGAGCGGTG GGTGGCGCGA
CTCGGCCGGT ACGCCGAGGT ACGCGAGGGA CACCTCACCG ACTGGACACA CCTGTGGGAA
CGCCTGTCCA TCGAATTCGA CGATTTCACC GACGAAGTGC GCATCCTGCG GCTGCATCTG
CTGCATCTGC TGCAGACCGT CTCCCCCAAC AGCGCCGACC TCGACGTGGG TGTGCCCGCG
CGTGGCCTGC ACGGTGAGGC ATACCGCGGC CACATCTTCT GGGATGAGCT GTTCATCTTC
CCGGTGCTCA ATCTGCGGCT GCCCATGATC ACCCGATCGC TGCTGGCGTA CCGCTACCGG
CGGCTGCCGG AGGCCCGGCA CGCCGCCAGG GAGGCCGGTT ACGCCGGCGC GATGTTCCCC
TGGCAGTCCG GAAGCGACGG CCGCGAGGAA AGCCAACGGC TGCACCTGAA TCCGCGCAGC
GGCAACTGGA ATCCCGATGC GAGCGCTCGC GCGCACCACA TCGGTATCGC CGTGGCCTAC
AGCGCGTGGA AGTTCTACCA GGCCACCGGG GATCTCGCCT ACCTGATCGA CTACGGCGCC
GAGATGCTGG CCGAGGTCGC GCGCTTCTGG GTGAGTCTGG CCAGCTACGA CGAAGACCGC
GGCCGCTACA GCATCCGCGG GGTCATCGGG CCCGACGAAT TCCACTCCGG CTACCCCGAC
GCACCCTACG ACGGCATCGA CAACAACGCG TACACGAACG TGATGGCGGT GTGGGTGATC
ATGCGGGCGC TCGACGCGTT GGACCTGCTT CCGCTGCCGA ACCGGCTCGA CCTGCTGGAG
ACGCTCGGGC TGACCAGCGG TGAACTGGCG CACTGGGACG ACGTGAGTCG CCGGATGTAC
GTGCCGTTCC ACGACGGTGT CATCAGCCAG TTCGAGGGCT ACGGCGAGCT CGAGGAGCTG
GACTGGGACC GCTACCGCGC CCACTACGGC AACATCCAGC GCCTCGATCG CATCCTCGAG
GCGGAGAACG ACGACGTGAA CCGGTACAAG GCGTCCAAAC AGGCCGACGT GCTGATGTTG
CTGTACCTGA TGTCGGTGCC CGAACTCGGC GAGATCCTGA ACCGGCTCGG TTATCACTTC
CCCGCGGACC AGGTTCCGAG CATGGTCGAC TACTACCTGG CCCGCACGTC GCACGGGTCC
ACGCTCAGCG GAGTCGTGCA CACCTGGGTC CTGGCGCGCG CCAACCGCGA CCGTGCGATG
GAGTTCTTCG AACTGGCGCT CAAGTCCGAC GTCTCCGACA TCCAGGGCGG CACCACGTCC
GAGGGCATCC ACCTGGCCGC CATGGCCGGC ACCGTCGATC TGATGCAACG CTGCTTCACC
GGATTGGAGA CCCGGTCCAA CCGCCTCATC CTTTCCCCGT ACTGGCCGGA AAGCCTTGGG
GTGCTGGCGG TCCCGATCCA CTACCGGGGC CTGCACCTGC ACCTGCGGGT CAGCGGTAAG
GGTGTGATCA TCAGCGTCGA CCCACGCGAG GCCGCCGGGG TGGTGGTGGA ATGCCGGGGG
CGGGTGGTGC AGCTGATGCC GGGCACCACC GTCCGCTTCC CCGGCTGA
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| Protein sequence | MTVPVVIDPR YHDAVIFDLD GVLSDPAPTV TLARELQDVG VKTAACSSNS HGRDMVKSIG
AEGFDVCVDG SAEDRAGAPC LEAARRLGVR PQRAVLIEDS AAGRTPGRDG GFALVIRVDR
TRHPDEPIDG DADRVVAGLA GIAVRTGDRR VSEVPNALES YGQLIGITGA RESVLFLDYD
GTLSPIVSEP DAAVLVDGAA EALALVAAVC PVAILSGRDL ADVRTRVGAP GLWYAGSHGF
ELTGPDGTYH QNEAAAAFVP VLERAAGDLR DLLGHVPGIF VEHKRFAVAV HYREVGSSDE
VAEIVSTTHR LGRQAGLRVT SGRMLVELRP DIDWDKGTTL RWIRDRIDAA GSLMPIYIGD
DLTDEDAFDA VRFDGVGIVV RHDEDSDRKT AARFSLQSPD QVREFLQRGS QWLAYKHQVA
SEAWDLTYEG YDPQSEKLRE ALCTVGNGYF ATRGAAPESK AGQVHYPGTY AAGIFNRLVD
DVSGTAVDNE SLVNLPDWLS LTFRIDGGDW FDIDEVEVLS YRQTLDLRGA TLTREVRFRD
DAGRTTSVTQ QRFVAMHLPH VGALQTKIVA EDWSGRITIR STLDGNVTNS LVERYRDLGK
EHLELIEKRQ LSDDSVLLTV RTTQSGIPIA MAARCIVWRD DAPVGASYRL VGDGAEIGHE
ITVEQSVGEA LTVEKLVTLF TGRDVATSDP AVDAERWVAR LGRYAEVREG HLTDWTHLWE
RLSIEFDDFT DEVRILRLHL LHLLQTVSPN SADLDVGVPA RGLHGEAYRG HIFWDELFIF
PVLNLRLPMI TRSLLAYRYR RLPEARHAAR EAGYAGAMFP WQSGSDGREE SQRLHLNPRS
GNWNPDASAR AHHIGIAVAY SAWKFYQATG DLAYLIDYGA EMLAEVARFW VSLASYDEDR
GRYSIRGVIG PDEFHSGYPD APYDGIDNNA YTNVMAVWVI MRALDALDLL PLPNRLDLLE
TLGLTSGELA HWDDVSRRMY VPFHDGVISQ FEGYGELEEL DWDRYRAHYG NIQRLDRILE
AENDDVNRYK ASKQADVLML LYLMSVPELG EILNRLGYHF PADQVPSMVD YYLARTSHGS
TLSGVVHTWV LARANRDRAM EFFELALKSD VSDIQGGTTS EGIHLAAMAG TVDLMQRCFT
GLETRSNRLI LSPYWPESLG VLAVPIHYRG LHLHLRVSGK GVIISVDPRE AAGVVVECRG
RVVQLMPGTT VRFPG
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