| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3371 |
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| Symbol | |
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| ID | 4112203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 3572022 |
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| End bp | 3573842 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638032504 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_640534 |
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| Protein GI | 108800337 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG CACCCACCTT GAAAAAGGCG CTCAACCAGC GCCAACTGCG GATGATCGCC
ATCGGCGGCG TCATCGGCGC CGGACTGTTC GTGGGGTCCG GGGTGGTGAT CGCCGACACC
GGGCCCGGCT CTTTCCTCAC CTACGCGATG AGTGGCGTGC TCATCATCAT GGTGATGCGG
ATGCTCGCCG AGATGGCGGT GGCCAATCCG TCCACGGGCT CGTTCGCCGA CTACTCGCGC
AACGCCCTGG GCAACTGGGC GGGTTTCTCC GTCGGGTGGC TCTACTGGTA CTTCTGGGTC
ATCGTCGTCG GATTCGAGGC GATCGCGGGC GCGAAGATCA TCCAGTACTG GATCGACGTC
CCGCTGTGGG CGTCCTCGCT GGTGTTCATG GTGCTGATGA CGGCGACCAA CCTGTTCTCG
GTGAAGTCCT ACGGCGAGTT CGAGTTCTGG TTCGCCGGGA TCAAGGTCGC CGCGATCGTG
GCCTTCATCG CGCTCGGTGC GCTGTTCGTG GTGGGGCTGT GGCCGGGTAA GGACGCCGAC
TTCTCGAATC TGACCGCGCA CGGCGGCTTC ATGCCGATGG GCTTCGGGGT GATCACCGTG
GGGATCGTGA CGGTGATCTT CTCGATGGTG GGCGCCGAGA TCGCGACGAT CGCGGCCGCC
GAGTCGGCGG ACCCCGAGCG GGCGGTGTCC AAGGCCGCGA ACTCGGTGAT CGTGCGCATC
CTGCTGTTCT ACGTGGGCTC CGCGCTGCTG CTCGTGACGA TCCTGCCGTG GAACGACGAG
GGGATCGCTG CGTCACCGTT CGTCGCGGCG TTCACCGAGA TGGGCATTCC CTATGCCGAC
CACGTGATGA ACGCCGTCGT GCTCACCGCG GTGCTGAGCT GTCTGAACTC CGGGATGTAC
ACGGCGTCGC GCATGCTGTT CGTCCTCGCC GCCCGGCGGG AAGCGCCGCC CTCGCTGGTC
CGGGTGACCC GCAGGGGAGT GCCGGCACAG GCGATCCTGG CGTCGTCGGT GGTCGGGTTC
CTGTGCGTGA TCGCCGCGGC GGTGTCACCG GACACCATCT TCGCGTTCCT GCTCAACTCC
AGCGGCGCCA TCATCCTGTT CGTCTACCTG CTCATCGCCG TCTCCCAGAT CATCCTGCGC
AGGCGCACAC CGGATTCCGA ACTGCGCGTG AAGATGTGGC TCTTCCCGGT GCTGTCGGTG
CTCACCGCGG TCGGGATCGT GGCGATCCTG GTGCAGATGT TCATCGACGA CGCGCTGCGG
TCCCAGTTGG TGCTGAGCCT GCTGTCCTGG GGAGTGGTGC TGTTGCTCTA CTTCGCCAAC
AAGCACTTCC TCAAGCGCCG GCCGACCAAG GCAGGGGTCA CCGGCACCGG CAAACCGCAT
CGGGTCCTCG TGCTGGCCAA CCAGACCGTC AACTCGACGG AGCTGCTCGA CGAGCTGCAC
CGGATCGGCG CCGATCAGGA GACGCACTAC TTCGTGGTGG TGCCGGTCAG CCCGATCGAG
ACGGGCACGG CCGAGACGCA CGGACCGCTC GACGTCGAGG AGGCCACCCA GAAGGCCGCC
TCCGAACGCC TCGACCTGAC GCTGAACGCG TTGCGCGGGC ACGACTTCAC CGCCGACGGC
GAGCTCGGCG ACCGCCGGCC GCTGCGGGCG CTGGCCGACG CCGTCGAGAG TTTCGACCCC
GACCAGATCG TCATCTCGAC GCTGCCGCCC GAGAAGTCGG TGTGGCAGCG CTTCGACGTC
GTCGACCGGG CCCGCGCACA GCACAGGGTT CCGGTGACCC ACGTGGTCGC CACGGGCGCC
GAAGCCACGG CCACGCCATG A
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| Protein sequence | MSAAPTLKKA LNQRQLRMIA IGGVIGAGLF VGSGVVIADT GPGSFLTYAM SGVLIIMVMR
MLAEMAVANP STGSFADYSR NALGNWAGFS VGWLYWYFWV IVVGFEAIAG AKIIQYWIDV
PLWASSLVFM VLMTATNLFS VKSYGEFEFW FAGIKVAAIV AFIALGALFV VGLWPGKDAD
FSNLTAHGGF MPMGFGVITV GIVTVIFSMV GAEIATIAAA ESADPERAVS KAANSVIVRI
LLFYVGSALL LVTILPWNDE GIAASPFVAA FTEMGIPYAD HVMNAVVLTA VLSCLNSGMY
TASRMLFVLA ARREAPPSLV RVTRRGVPAQ AILASSVVGF LCVIAAAVSP DTIFAFLLNS
SGAIILFVYL LIAVSQIILR RRTPDSELRV KMWLFPVLSV LTAVGIVAIL VQMFIDDALR
SQLVLSLLSW GVVLLLYFAN KHFLKRRPTK AGVTGTGKPH RVLVLANQTV NSTELLDELH
RIGADQETHY FVVVPVSPIE TGTAETHGPL DVEEATQKAA SERLDLTLNA LRGHDFTADG
ELGDRRPLRA LADAVESFDP DQIVISTLPP EKSVWQRFDV VDRARAQHRV PVTHVVATGA
EATATP
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