Gene Mmcs_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3346 
Symbol 
ID4112178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3546090 
End bp3546767 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID638032478 
ProductHAD family hydrolase 
Protein accessionYP_640509 
Protein GI108800312 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.307883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACA CGCTGGCCCG TTCCACCGCC ACCCGCCCGC AGCTCGTGCT GTTCGATCTG 
GACGGCACGC TGACCGATTC GGCGGAGGGC ATTGTGGCGA GCTTCCGGCA TGCGCTGGGT
GAGGTCGGGG CGCCGGTTCC CGACGGTGAT CTGGCCGGCC GCATCGTCGG CCCGCCGATG
CACCACACCC TGCGCTCGCT CGGCCTCGGC GAGCAGGTCG ACGCGGCGAT CGCGGCCTAT
CGGGCCGACT ACACCTCACG CGGCTGGGCG ATGAACCGCA CCTTCGACGG CATCCCGGCC
CTGCTGGCCG ACCTGCGGGC GGCGGGGATT CGCCTGGCCG TGGCGACCTC CAAGGCGGAG
CCGACTGCGC AGCGCATCCT GGCCCATTTC GGCCTCGACG GCTTCTTCGA GGTCATCGCG
GGCGCCAGCC CGGACGGGAC GCGCGCGGTC AAGGCCGACG TCGTCGCCTC CGCACTGGCC
CGGCTGGAAC CCCTGCCGGA ACGGGTGGTG ATGGTCGGCG ACCGCCTGCA CGACGTGGAG
GGCGCAGCGG CGCACGGTAT CGACACGGTG GTGGTCGGCT GGGGCTACGG CCGCGCCGAC
TTCGCCGAGC CCACCTCGGT GCCGGCGTTC GCGCACGTGG ACAGCGTGGC CGACCTGCGG
GAGGTGCTGG GTGTCTGA
 
Protein sequence
MTDTLARSTA TRPQLVLFDL DGTLTDSAEG IVASFRHALG EVGAPVPDGD LAGRIVGPPM 
HHTLRSLGLG EQVDAAIAAY RADYTSRGWA MNRTFDGIPA LLADLRAAGI RLAVATSKAE
PTAQRILAHF GLDGFFEVIA GASPDGTRAV KADVVASALA RLEPLPERVV MVGDRLHDVE
GAAAHGIDTV VVGWGYGRAD FAEPTSVPAF AHVDSVADLR EVLGV