Gene Mmcs_3339 details

Gene Information

• Locus tag: Mmcs_3339
• ID: 4112171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 3539854
• End bp: 3540471
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638032471
• Product: methyltransferase type 12
• Protein accession: YP_640502
• Protein GI: 108800305
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG2813] 16S RNA G1207 methylase RsmC

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.102767
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAGA CGGTGGAGTT CTGGGAGGAG CACTACGGCG CGAAGGACCG GGTGTGGAGC 
GGCCGGGTCA ATGTTCGGCT GGCCGAGATC GTCGAACCGT TGCCGCCGGG GCGCGCGCTC 
GACCTCGGCT GCGGCGAGGG TGCGGATGCG ATCTGGCTGG CCGGGCACGG ATGGCAGGTG 
GTCGGCGTGG ACGTCTCGCA CACCGCGCTG CAACGGGCCG CCGAGGACGC CGCGGCAGCC 
GGGGTGGCCG AGCGTGTCCG GTTCGAACAG CACGACCTGG CCGAGACGTT CCCCGAGGGG 
CGGTTCGACC TGGTGTCGGC GCAGTTCTTC CATTCCCCGC TCGACGTGGA CCGCACCGGT 
GCGCTGCGCC GGGCGGCCGA TGCCGTCACG GTGGGCGGGC TGCTGCTGAT CGTCGATCAC 
GGAGCGACGC CGGAGTGGAC GTGGAAGGAC GGGCACCCGC ACGATCTGCC GTCGCTGCAG 
GACGCCCTGG CGTCGCTGGC GGTGGACCCC GAGGCCTGGG AGGAACTCCG GGTCGAGGCG 
GTCGAGCGGG ACGGGGTGAG CCCCGACGGG CAGCCGGTGA CGTGGCTGGA CAACGTCATC 
CTGTTGCGGC GCCGCTGA 

 

Protein sequence

MSETVEFWEE HYGAKDRVWS GRVNVRLAEI VEPLPPGRAL DLGCGEGADA IWLAGHGWQV 
VGVDVSHTAL QRAAEDAAAA GVAERVRFEQ HDLAETFPEG RFDLVSAQFF HSPLDVDRTG 
ALRRAADAVT VGGLLLIVDH GATPEWTWKD GHPHDLPSLQ DALASLAVDP EAWEELRVEA 
VERDGVSPDG QPVTWLDNVI LLRRR