| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3299 |
|---|
| Symbol | |
|---|
| ID | 4112131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3496319 |
|---|
| End bp | 3498286 |
|---|
| Gene Length | 1968 bp |
|---|
| Protein Length | 655 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638032431 |
|---|
| Product | asparagine synthase (glutamine-hydrolysing) |
|---|
| Protein accession | YP_640462 |
|---|
| Protein GI | 108800265 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCGGAC TGCTGGCGTT CCTGAAAGAC CCGTCCGCGC AGTCCTCCCC CGCGCTGGTC
GGCGCGGTCT CGGGGGCTGC TGAACTGATG CGGCACCGGG GGCCCGACGA ACCGGGCACC
TGGGCGGACG ACACCGATGA CCCGGGCATC GTGCTGGGCT TCAATCGGCT GTCGATCATC
GACATCGCGC ACAGTCACCA ACCGCTGCGC TGGGGTCCGC CCGAGGCGCC GCTGCGCTAC
GTCCTGGTGT TCAACGGGGA GATCTACAAC TACCTGGAAC TCCGTGAGGC GTTGCGCACC
GAACACGGCG CCGAGTTCGC CACCGACGGG GACGGCGAGG CGATCGTCGC GGCCTACCAC
CACTGGGGCC CTGCGGCGCT GTCGCGGCTG CGCGGCATGT TCGCGTTCGC GCTGTGGGAC
ACCGTCACCG GTGAGCTGTT CTGCGCACGG GATCCGTTCG GCATCAAACC GCTCTACATC
GCCACCGGCC CCGGTGGCAC CGCGGTCGGC AGCGAGAAGA AGTGCCTGAT GGCCGTCGCC
GACCAGCTCG GCATCGACAC CGGCCTCGAC GAGCGTGCGG TGCAGCACTA CACCGTGCTG
CAGTACGTGC CCGAGCCCGA GACGCTGCAC CGCGGCGTGC GCCGGCTCGA GTCGGGCAGC
TACCTGCGGA TGCGCCCGGG GCAGGCTCCG GTGGTCACCC GCTACTTCAC CCCCCGCTTC
GACGCGGTTC CTTTTCGCGC CGCTTCCGCG CCTGGTTCGG CGGGCGGCGT CGATCAGGCC
CGCTACGACG AGATCACCGC GGTACTCGAG GACTCGGTGG CCAAACACAT GCGCGCCGAC
GTCACCGTCG GCGCCTTCCT GTCCGGCGGC ATCGACTCCA CCGCCATCGC CGCGTTGGCG
ATGCGCCACA ACCCGCGCCT GATCACATTC ACCACCGGAT TCGAGCGCGA GGGGTTCTCG
GAGGTCGACG TCGCGGTGGC GTCGGCGGAG GCGATCGGCG CCCGGCACGT CACCAAGGTG
GTCAGCCAGG CGGAGTTCGT CGAGGCGCTG CCCGCGATCG TCTGGTATCT CGACGAGCCG
GTGGCCGATC CGGCGCTGGT ACCGCTGTAC TTCATCGCCC GCGAGGCGCG TAAGCACGTC
AAGGTGGTGC TCTCCGGGGA GGGCGCCGAC GAGTTGTTCG GCGGCTACAC CATCTACCGC
GAACCATTGT CGCTGCGGGC GTTCGACTAC CTGCCGCGGC CGGTCCGCCG CTCGTTGCGC
CGGGCGTCGG CCCCGCTCCC CGAGGGGATG CGCGGCAAGA GCCTGCTGCA CCGCGGTTCG
CAGACCCTCG AGGAGCGGTA CTACGGCAAC GCCCGCAGTT TCTCCGACGA GCACCTGCGC
GCGGTGCTGC GCCGCTTCTC GCCGGACTGG ACGCACACCG ACGTCACCGC CGCGCTCTAC
CGGGAGTCCG ACGGCTGGGA TCCGGTCGCG CGCATGCAGC ACATCGACCT GTTCACCTGG
CTGCGCGGCG ACATCCTGGT CAAGGCCGAC AAGATGACGA TGGCCAACTC GCTGGAGCTG
CGGGTGCCGT TCCTCGATCC CGAGGTGTTC GCGGTCGCGT CGCGGCTGCC GCTGGAGCAG
AAGATCACCC GGGCCACCAC GAAGTTCGCC CTGCGGCGCG CGCTGGAACC GGTCGTGCCC
GCACACGTGC TCAACCGCCC GAAACTCGGC TTCCCGGTCC CGATCCGGCA CTGGTTGCGT
GCCGGGGAAC TGCTGGAATG GGCCTACGAG ACGGTCGCCG CGTCACAGAC GGGCGATCTC
ATCGACGCCG AGGCGGTGCG CACGATGCTC GACGAGCACC GGACCGGGGT CAGCGATCAC
AGCCGCCGGT TGTGGACCGT GCTGATCTTC ATGCTCTGGC ATGCGATCTT CGTCGAGGGC
AGTGTGACTC CCCGGATCGA GGAGCCGCAC TACCCCGTCC AGCTTTAG
|
|---|
| Protein sequence | MCGLLAFLKD PSAQSSPALV GAVSGAAELM RHRGPDEPGT WADDTDDPGI VLGFNRLSII
DIAHSHQPLR WGPPEAPLRY VLVFNGEIYN YLELREALRT EHGAEFATDG DGEAIVAAYH
HWGPAALSRL RGMFAFALWD TVTGELFCAR DPFGIKPLYI ATGPGGTAVG SEKKCLMAVA
DQLGIDTGLD ERAVQHYTVL QYVPEPETLH RGVRRLESGS YLRMRPGQAP VVTRYFTPRF
DAVPFRAASA PGSAGGVDQA RYDEITAVLE DSVAKHMRAD VTVGAFLSGG IDSTAIAALA
MRHNPRLITF TTGFEREGFS EVDVAVASAE AIGARHVTKV VSQAEFVEAL PAIVWYLDEP
VADPALVPLY FIAREARKHV KVVLSGEGAD ELFGGYTIYR EPLSLRAFDY LPRPVRRSLR
RASAPLPEGM RGKSLLHRGS QTLEERYYGN ARSFSDEHLR AVLRRFSPDW THTDVTAALY
RESDGWDPVA RMQHIDLFTW LRGDILVKAD KMTMANSLEL RVPFLDPEVF AVASRLPLEQ
KITRATTKFA LRRALEPVVP AHVLNRPKLG FPVPIRHWLR AGELLEWAYE TVAASQTGDL
IDAEAVRTML DEHRTGVSDH SRRLWTVLIF MLWHAIFVEG SVTPRIEEPH YPVQL
|
|---|
| |