Gene Mmcs_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3238 
Symbol 
ID4112070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3432717 
End bp3434336 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content70% 
IMG OID638032370 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_640401 
Protein GI108800204 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.698752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTCAC GTTGGTCCGC GACGGTGCGC GGATTCGGTG CCCGCAGCCT GGCCGGACGG 
TTCCTGGTGT TCCAGCTGCT GGTGGTGGCG GTGGTGCTGC CGGCCGTGGC GGCGGTCTCG
ATCGCGCAGT CCACCCGGGA GTTCCGGGAA ACGCGCAGCC AACGCATGAT CGCGGTCGCC
GAGAACGTCG CGTCCACCCC GATCGTGCGG GACCGCTTGG CCGATCCGTT CGCCGCGCGG
GTACTGGCGC CGGAGGTGGA TCGGGCGGTG GCGCTCTCAG GTGCGGCGCT GGCGGAGATC
GTCGCTGCGG ACGGCACGGT GCTGGTGTCG TCGGATCCGT CGCGCGTCGG TAACCGGGTG
GACCTGAGCG TCACCCGCGC CGACGAGGGC CGGGCCTGGT ACGGCGACGA CGACATCGAC
GGTGTGCACA GCTTGATCGG GCACGTGCCG GTGCTGACCA ACCGGGGTGA GGTGCTGGCG
ATCGCGTCGG TCAGCGAACC GTATCCGTCG GTGTGGCAAC TGCTCAGCGG GGCCGGTGAA
CGTCTCGTGC TCTACCTCGG ACTGGCCGCG GCACTGGGGC TGGTGGCCTC GTGGCTGCTG
TCGCGGCGGA TCAAGCGACA CACCAGGGGC CTGGAGGTGG CCGAGATCGC CGGCCTGGCG
GATCACCGGG AAGCGTTGCT GCACAGCATC CGTGAGGGTG TCGTGGCCGT GAACACCGAC
GGTGTCATCA CCCTGCTCAA CGACAGCGCC CAGGAGTTGC TCGGACTCTC GGGGGCGGCG
GTGGGCCGGC GCGCCGATGC GGTGGGGCTC GATCCGGCGG TGGTCGAATT CCTGCTCTCC
GGTGAGGACG GCCGCGACGT CGTGATCGCC ACCCGCACCC GGGTGTTGGC GCTCAACCGG
CGCACCGCCT CGAGCGGGGG TGAGTGGATC GGTACGGTGA CCACGATGCG TGACAGCACC
GAACTGGCCG CCCTGCAGGC ACAGTTGTCG TCACACAAGA GCGTCACCGA CACGTTGCGC
GCGCAGACGC ACGAATTCGC CAACCAGTTG CACACCATCT CGGGGCTGGT TCAGCTGGGC
GAATATGACG CGGTGCGGGA TCTCATCGGC GAGTTGACGC GCCGGCGTGC GGAGATCAGC
GACGCGGTGA CCCGCCGGAT CGCCGACCCC GCGGTCGCGG CGCTGCTGAT CGCGAAGACC
ACGCTGGCCG CCGAGAGCGG GGTGACGCTG TGGCTCGACC CGGATTCGCA TCTCGGCGCA
TTGGATCCGG CGGCGGCGAC CGACGTGATC ACCCTGCTGG GCAACCTGAT CGACAACGCG
GTCGACGTAT CCGTGGGTTC GGGGGCGGCG CGGGTGAGCG TGCGCATCGA CGACGCCGAC
GGATTGTCGA TCACCGTCGC CGACACCGGA CCCGGTGTGC CCGAACATCT CCGGGAAGAG
ATCTTCGCCC GCGGGGTGAC CTCGAAACCC GAGTCGCCGG GCGGTCGCGG GATCGGCCTG
GCACTGGTCC GGCTGGTCAC CGCCCAGCAC GGCGGCGTGG TGGACGTCTC CGACCGCGCG
GACGGTGGCG CAGTGTTCAC CGTGCGGTTG CCGCCCAGCC GGGTGGCAGC GCATGCGTGA
 
Protein sequence
MSSRWSATVR GFGARSLAGR FLVFQLLVVA VVLPAVAAVS IAQSTREFRE TRSQRMIAVA 
ENVASTPIVR DRLADPFAAR VLAPEVDRAV ALSGAALAEI VAADGTVLVS SDPSRVGNRV
DLSVTRADEG RAWYGDDDID GVHSLIGHVP VLTNRGEVLA IASVSEPYPS VWQLLSGAGE
RLVLYLGLAA ALGLVASWLL SRRIKRHTRG LEVAEIAGLA DHREALLHSI REGVVAVNTD
GVITLLNDSA QELLGLSGAA VGRRADAVGL DPAVVEFLLS GEDGRDVVIA TRTRVLALNR
RTASSGGEWI GTVTTMRDST ELAALQAQLS SHKSVTDTLR AQTHEFANQL HTISGLVQLG
EYDAVRDLIG ELTRRRAEIS DAVTRRIADP AVAALLIAKT TLAAESGVTL WLDPDSHLGA
LDPAAATDVI TLLGNLIDNA VDVSVGSGAA RVSVRIDDAD GLSITVADTG PGVPEHLREE
IFARGVTSKP ESPGGRGIGL ALVRLVTAQH GGVVDVSDRA DGGAVFTVRL PPSRVAAHA