| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3231 |
|---|
| Symbol | |
|---|
| ID | 4112063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3425635 |
|---|
| End bp | 3428094 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638032363 |
|---|
| Product | nitrite reductase (NAD(P)H) large subunit, NirB |
|---|
| Protein accession | YP_640394 |
|---|
| Protein GI | 108800197 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA GACGACTCGT CGTCATCGGC AACGGGATGG CCGGCGTCCG CGCGATCGAG
GAGATCCTCG CGCGCGGCGG CGCCGACATG TTCGAGATCA CCGTGTTCGG CGACGAACCG
TACGGCAACT ACAACCGCAT CCTGCTGTCG AACGTGTTGT CCGGCAGTGA CGATACCTCC
GAGATCTACC TCAACCCCCT CGACTGGTAC ACCGGCAACG GCATCGATCT GCGGGCCGGG
GTGCGGGTGG TGCGCATCGA CCGCTACGCC CGTCTGGTGC ACGCCGACGA CGGCACCGCA
CTGCACTACG ACGAGCTGAT CGTGGCCACC GGGAGCCGCT CCTTCTTCCC GCCGATCACC
GGGTTGTGGG CCGACGACAA GACGCTGGCC GACGGGGTGT TCGGCTTCCG CACCCTCGAC
GACTGCCTGG GCATGATCCA CGAGGCCGAA CACCGGACCA AGGCCGTGGT CATCGGCGGT
GGGCTGCTGG GGCTGGAAGC CGCACGCGGC CTGCAGAACC GGGGTCTGAC CGTGGACGTG
GTGCACGCCG GCGCAACGCT GATGAACGCC CAACTCGACG ACACCGCGGG CGCGATCCTG
CGACGCTCGG TCGAACGCCT GGGGATCACG GTGCACATGG ACAAACGCAC CACCGAGGCA
CTCCTCGGCG AGGACGGGAA GCTGCGCGGC ATCGGCTTCT CCGACGGCAG CACCGTCGAC
TGCGACATGC TGGTGGTCGC GGCGGGTATC CGGCCCAACG TCGGGCTCGC GCAGCGGGCC
GGCCTGACCG TCGAACGGGC CATCGTCGTC GACGACCACA TGCGCTCGAT CGACGACGAC
CACATCCACG TGGTCGGTGA GTGCGCGCAG CACCGCGGCC AGGTGTACGG GCTGGTGGCG
CCGCTGTGGG AGCAGGCAGG GGTGCTGGCC GCCCACCTCA CCGGCACCGA CCCGACCGCG
GCGTATCACG GCTCCCGGAC CGCGACCAAG CTCAAGGTCG CCGGGGTCGA CGTCGCCGCG
ATGGGGCTCA AGGCGCCCGA ACTGCCCGAC GACGAGTTCG TGCAGTACTC CGAGCCCAGG
CACGGGGTGT ACAAGACCAT CGTCATCCGC GACGGAAAGC TGGTCGGGGC AACACTTCTC
GGCGACGTCA GCAAGGTCTC GTTCCTGACG CAGGCGTTCG ACACGGGCCT GCCGCTCCCC
GAGGAGCGGG TATCGCTGAT GTTCGACATC GGCACCCCCG ACGTCGAGGT GGGGGTCGCC
GAGCTGGCCG ACGACGCGCA GGTGTGCAAC TGCAACGGGG TCTCCAAGGG CACGCTCGTG
GGGTGCGTGC GCGACGGGGA GGCCTCGGTG TCGGGGGTGA TGGCGAAGAC CAAGGCGGGC
AAGGGGTGCG GCTCGTGCAA GGAACTCGTC GGCCAGATCG TCGAATGGGC CGCCGGCGGG
GCCGTCACCG AGGATCCGTC GGCGTCCTGG TATGTGCCGG GTGTCCCGTA CGACAAGCCG
ACGCTGATGC GCCACATCCG TGAGCTGCGT CTGCATTCGG TGTCCTCGGT GTTCGCCGCA
CTCGCCCCCG ACGGCAGGGA GGACGCCGGC TCGAAGATGG CGCTGGCCTC ACTGCTCGAG
ATGATGTGGG CCGACGAGTT CGTCGACGAG CGCGACGCCC GGTTCATCAA CGACCGGGTG
CATGCCAACA TCCAGCGCGA CGGCACCTTC TCGGTGGTTC CGCAGATGAA GGGCGGCGTC
ACTAACCCGT GGCAGCTGCG CCGCATCGCC GACGTCGCGG ACAAGTACTC GATCCCGATG
ATCAAGCTCA CCGGCGGGCA GCGCATCGAC CTGCTCGGGG TGCGCAAAGA GGATCTGCCC
GCGGTGTGGG CCGATCTGGA CATGCCGTCC GGCTACGCGT ACGGCAAGAG CTTCCGCACG
GTGAAGACGT GCGTGGGCAG CGACTTCTGC CGGTTCGGCG TCGGTGACTC GACGGCGCTG
GGGATCGCGA TCGAAGACCG GTACAAGGGG TTGGCCAGTC CGGCGAAGAT GAAGCTCGCC
GTCACGGGAT GTCCGCGCAA CTGCGCCGAG TCGCTGTGCA AGGACCTCGG GGTCGTCGCG
ATCGACGGCG GCCGCTGGGA GATCTACGTG GGCGGGGCGG CCGGCGCGCA CATCCGCAAG
GGCGACCTGC TGGCCACCGT CGACTCTCCC GACGAGGTCA TGACGCTGAC GGGGCGGTTC
CTGCAGTACT ACCGGGAGAA CGCCAACTGG CTGGAGCGCA CCTACGCATT CGTCCCACGG
GTCGGCATCG AGAAGATCCG CGACGCGATC GCCGAGGACG CCGAAGGCCT GGATCAACGG
ATGCAGAAGT CCGTCGACGC CTACCGCGAT CCGTGGCACG ACGGCCGGGC GCCGGCGACC
GAGGGGCAGT TCCGGTCGTC GCTGCCGCTG CTGCCCCTTC CCCAGGTGCC GGTGCGATGA
|
|---|
| Protein sequence | MTRRRLVVIG NGMAGVRAIE EILARGGADM FEITVFGDEP YGNYNRILLS NVLSGSDDTS
EIYLNPLDWY TGNGIDLRAG VRVVRIDRYA RLVHADDGTA LHYDELIVAT GSRSFFPPIT
GLWADDKTLA DGVFGFRTLD DCLGMIHEAE HRTKAVVIGG GLLGLEAARG LQNRGLTVDV
VHAGATLMNA QLDDTAGAIL RRSVERLGIT VHMDKRTTEA LLGEDGKLRG IGFSDGSTVD
CDMLVVAAGI RPNVGLAQRA GLTVERAIVV DDHMRSIDDD HIHVVGECAQ HRGQVYGLVA
PLWEQAGVLA AHLTGTDPTA AYHGSRTATK LKVAGVDVAA MGLKAPELPD DEFVQYSEPR
HGVYKTIVIR DGKLVGATLL GDVSKVSFLT QAFDTGLPLP EERVSLMFDI GTPDVEVGVA
ELADDAQVCN CNGVSKGTLV GCVRDGEASV SGVMAKTKAG KGCGSCKELV GQIVEWAAGG
AVTEDPSASW YVPGVPYDKP TLMRHIRELR LHSVSSVFAA LAPDGREDAG SKMALASLLE
MMWADEFVDE RDARFINDRV HANIQRDGTF SVVPQMKGGV TNPWQLRRIA DVADKYSIPM
IKLTGGQRID LLGVRKEDLP AVWADLDMPS GYAYGKSFRT VKTCVGSDFC RFGVGDSTAL
GIAIEDRYKG LASPAKMKLA VTGCPRNCAE SLCKDLGVVA IDGGRWEIYV GGAAGAHIRK
GDLLATVDSP DEVMTLTGRF LQYYRENANW LERTYAFVPR VGIEKIRDAI AEDAEGLDQR
MQKSVDAYRD PWHDGRAPAT EGQFRSSLPL LPLPQVPVR
|
|---|
| |