Gene Mmcs_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3220 
Symbol 
ID4112052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp3412224 
End bp3412844 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content61% 
IMG OID638032352 
ProductTetR family transcriptional regulator 
Protein accessionYP_640383 
Protein GI108800186 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.626936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACTG AACCAGCGCG GGTGTCTTTC CGCCGGCATG TGCGCGAAAA GGTTTTGAGG 
GCGACACGAG AACTCGCCAT CGAGAAGGGC TGGGATCAGG TCCGGATGAG CGAGGTTGCC 
GAATCGGTCG GCGTCTCCCG CCCGACGTTG TACAAAGAGT TCGGCGACAA ACAGGGGCTC 
GGCGACGCGC TTGTGGTGTC GGAGGGCCAG CGCTTTATGG AAGGCATTCT TGCCGTCCTT 
GCCGAACACG TGGGCGACGT GCGGGGCGGC ATCACCGCAG CGGTGCAATT CACCCTCTGT 
GAAGCAGAAG ACAGCCCGCT CCTCAAGGCA GTTCTGACGT CCAACCCTTC GGGGAATGAT 
CGCGGTGGCT CGTCGTCTAC TGGAGTCCTA CCTCTTCTGC CGACGTCGGC TTCCCTGCTT 
CAGCTCTGCT CCGCGGCTCT GATCACGTGG TTTAACGACC ACTTCGACGA TCTCGATCCC 
GAAGACGTTG AGGAGGTCGC AGATGTTCTG GTGCGACTGA CAGTGAGTCA TGTTGTACTC 
CCAGCCGCGG ACATCGCCAC CACCGGTGAG CGGATCTCCC GCGTAGCACT CAGGTACCTG 
GGAGTTGTCC ACAGTTTGTA A
 
Protein sequence
MPTEPARVSF RRHVREKVLR ATRELAIEKG WDQVRMSEVA ESVGVSRPTL YKEFGDKQGL 
GDALVVSEGQ RFMEGILAVL AEHVGDVRGG ITAAVQFTLC EAEDSPLLKA VLTSNPSGND 
RGGSSSTGVL PLLPTSASLL QLCSAALITW FNDHFDDLDP EDVEEVADVL VRLTVSHVVL 
PAADIATTGE RISRVALRYL GVVHSL