Gene Mmcs_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3106 
Symbol 
ID4111938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3287331 
End bp3288020 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID638032236 
ProductABC-2 type transporter 
Protein accessionYP_640269 
Protein GI108800072 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCTGG TGTTCGCCGT GCTCATGCCG ACGTTCGTGT TGGCCGGTCT CGTGCTACTG 
CTGCAGGATG TCATCGCCAC CGGCCAGATG AGTTATACGC AATACGTGTT GCCTGCGGTG
GTCGTCCAGG CGATGCTGTT CGGTGCGCTG ACCACCACGG ATCGGGCGGC CTGGGACACG
ATCAGCGGGC TGAGCACACG GATGCGCACA CTGCCGATCT CTCCGTACGC GATGTTGACG
GCACGAATGA TCTACTGCCT GATCCGGGGC GTGCTGGCGG TGATCGCGTC GGTACTGGCC
GCCCACTGGT TCGGGTTCCG GTTCACCACC GGGTTCGGGT ACGGCGCGGC CTTCGTCCTG
ATGGCACTGA CGCTGACCTT GGCGTTGTCA CTAGGTGCGG ATGTGACCGG GACCAAGGCC
GGCCGGACCG AGGTGGCCAG CCAACTGCTG CTCGTCCCCC AACTGCTCCT CGTGCTGTTG
TCGACGGGCC TGGCGCCCCT CGAGGCGTTC CCGTCGTGGC TGCAAGGCTT CGTGCAGTAC
CAGCCGGTGT CACAGATCAC CGAGGCGATG CGCGGTTTCA CCAGCGGTCA CGTCGACGCG
GGCAATCTCG GCGTGAGCCT GGCATGGTGC GTCGGTCTGC TGCTGGTTTT CGGCACGATG
GCCGTCCGAT TGCAGGGGCG AACGCCGTGA
 
Protein sequence
MDLVFAVLMP TFVLAGLVLL LQDVIATGQM SYTQYVLPAV VVQAMLFGAL TTTDRAAWDT 
ISGLSTRMRT LPISPYAMLT ARMIYCLIRG VLAVIASVLA AHWFGFRFTT GFGYGAAFVL
MALTLTLALS LGADVTGTKA GRTEVASQLL LVPQLLLVLL STGLAPLEAF PSWLQGFVQY
QPVSQITEAM RGFTSGHVDA GNLGVSLAWC VGLLLVFGTM AVRLQGRTP