Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3106 |
Symbol | |
ID | 4111938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 3287331 |
End bp | 3288020 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638032236 |
Product | ABC-2 type transporter |
Protein accession | YP_640269 |
Protein GI | 108800072 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACCTGG TGTTCGCCGT GCTCATGCCG ACGTTCGTGT TGGCCGGTCT CGTGCTACTG CTGCAGGATG TCATCGCCAC CGGCCAGATG AGTTATACGC AATACGTGTT GCCTGCGGTG GTCGTCCAGG CGATGCTGTT CGGTGCGCTG ACCACCACGG ATCGGGCGGC CTGGGACACG ATCAGCGGGC TGAGCACACG GATGCGCACA CTGCCGATCT CTCCGTACGC GATGTTGACG GCACGAATGA TCTACTGCCT GATCCGGGGC GTGCTGGCGG TGATCGCGTC GGTACTGGCC GCCCACTGGT TCGGGTTCCG GTTCACCACC GGGTTCGGGT ACGGCGCGGC CTTCGTCCTG ATGGCACTGA CGCTGACCTT GGCGTTGTCA CTAGGTGCGG ATGTGACCGG GACCAAGGCC GGCCGGACCG AGGTGGCCAG CCAACTGCTG CTCGTCCCCC AACTGCTCCT CGTGCTGTTG TCGACGGGCC TGGCGCCCCT CGAGGCGTTC CCGTCGTGGC TGCAAGGCTT CGTGCAGTAC CAGCCGGTGT CACAGATCAC CGAGGCGATG CGCGGTTTCA CCAGCGGTCA CGTCGACGCG GGCAATCTCG GCGTGAGCCT GGCATGGTGC GTCGGTCTGC TGCTGGTTTT CGGCACGATG GCCGTCCGAT TGCAGGGGCG AACGCCGTGA
|
Protein sequence | MDLVFAVLMP TFVLAGLVLL LQDVIATGQM SYTQYVLPAV VVQAMLFGAL TTTDRAAWDT ISGLSTRMRT LPISPYAMLT ARMIYCLIRG VLAVIASVLA AHWFGFRFTT GFGYGAAFVL MALTLTLALS LGADVTGTKA GRTEVASQLL LVPQLLLVLL STGLAPLEAF PSWLQGFVQY QPVSQITEAM RGFTSGHVDA GNLGVSLAWC VGLLLVFGTM AVRLQGRTP
|
| |