| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3093 |
|---|
| Symbol | lspA |
|---|
| ID | 4111925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3272005 |
|---|
| End bp | 3272697 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638032223 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_640256 |
|---|
| Protein GI | 108800059 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.280943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGACTG ACGAAACACC GGGCAAGGCA TCGGGCAAGG TGGAGCCCAC GACCGGCGCC
GCGGAACCCC CGGACGTCCC GGTCGACCCG GCACCCCGGC CGCGGCGGCG CCTGGGCCTG
CTGTTGTCGG TCGCGGCGGT GGTCCTGGTG CTCGACGTCG TGACGAAGGT GCTCGCGGTG
CGGCTGCTGA CACCCGGCCA GCCGGTGTCG ATCATCGGCG ACACGGTCAC CTGGACCCTG
GTCCGCAACT CCGGGGCGGC CTTCTCCATG GCCACGGGTT ACACCTGGGT GCTCACCTTG
GTCGCGACGG GCGTGGTCAT CGGCATCATC TGGATGGGCC GGCGGCTGGT GTCGCCGTGG
TGGGCGCTCG GACTCGGGCT GATCCTCGGC GGCGCGATGG GCAACCTGAT CGACCGTTTC
TTCCGGTCGC CCGGACCGCT GCGCGGCCAC GTCGTCGACT TCCTGTCCAT CGGATGGTGG
CCGGTGTTCA ACGTGGCCGA TCCGTCGGTG GTCGGTGGGG CGATCCTGCT GGTGGTGCTG
TCGCTGTTCG GGTTCGACTT TGACACCGTC GGACGGCGCC AGCCGGGCGA CGAATCCGAC
CCGGTCGGAC GGCGCCAGCC GGGCGACGAA TCCGACCCCG GCGGACGGCG CGGCGCCGAA
CCGGTGGCCC GGCCCGAGGC TGACCCGTCA TAG
|
|---|
| Protein sequence | MVTDETPGKA SGKVEPTTGA AEPPDVPVDP APRPRRRLGL LLSVAAVVLV LDVVTKVLAV
RLLTPGQPVS IIGDTVTWTL VRNSGAAFSM ATGYTWVLTL VATGVVIGII WMGRRLVSPW
WALGLGLILG GAMGNLIDRF FRSPGPLRGH VVDFLSIGWW PVFNVADPSV VGGAILLVVL
SLFGFDFDTV GRRQPGDESD PVGRRQPGDE SDPGGRRGAE PVARPEADPS
|
|---|
| |