| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3091 |
|---|
| Symbol | |
|---|
| ID | 4111923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3270141 |
|---|
| End bp | 3271079 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638032221 |
|---|
| Product | rarD protein |
|---|
| Protein accession | YP_640254 |
|---|
| Protein GI | 108800057 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | [TIGR00688] rarD protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.381827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGA CGCGCCGCAA CGGCCTGCTC TTCGGCATCG GCGCCTATGT CTGGTGGGGG
CTGTGTCCGG GGTTCTTCCT GCTGTTGCTG CCCGCCGGGT CCCTCGAGAT CCTCGCGCAC
CGCATCGTGT GGAGTGTGGT GTTCCTGCTG CTGGTGCTCG CGGTGGCCCG TCGCCTCGGC
GATCTGCTCC GATTGTCCTG GCGCACCTGG CTGCAACTGC TCGCGGCGTC GGCGCTGGTG
TCGGCGAACT GGGGGGTCTA CATCTACGCG GCCACCCACT CACACGTGGT GGACGCCGCC
CTCGGGTATT TCATCAACCC GCTGCTGAGC GTCGCGCTCG GGGTGCTGGT GTTCCGGGAA
CGGATCAACC GCTCGCAGCA GGTGGCGCTG GTGCTCGCCG TCGCCGCGGT CGTCCTGCTC
ACCGTCGAAA TCGGCGCCCC GCCCTACATC GCACTCGCCC TTGCGGTGTC TTTCGCGCTC
TACGGGCTGG TGAAGAAGGT GGTCACCGCC GACCCGCGGG TCAGCGTCGC GGTGGAGACG
CTGATCGCGC TGCCGTTCGC GGGCGGCTAC GTGCTGGCGC TGGAACTCAC CGACCGGGGG
CATTTCCTCA GCGAAGGGCT CGCACACACC GGTCTGCTGC TGCTGGCGGG CCCGGTCACG
GCCATCCCGC TGCTGTTGTT CGGCGCGGCC GCGCAGCGGC TCCCGCTGGT GACGCTGGGT
CTGCTGTTCT ACATCAATCC TGGTCTGCAG ATGGCCTGGG GAGTGGTGAT CGGGCATGAA
CCGATGCCGG TCGGACGGTG GATCGGCTTC GCACTGATCT GGCTGGCGCT GGCCCTGCTG
GCCGCCGATG CCGTGCGCCG TCGCACGCCG AGGGAGCGAA CCTCCACGAC ACCGGCGGAA
CATGTCGATC GGGACGAATC GAAATCGTCA TCACACTGA
|
|---|
| Protein sequence | MTETRRNGLL FGIGAYVWWG LCPGFFLLLL PAGSLEILAH RIVWSVVFLL LVLAVARRLG
DLLRLSWRTW LQLLAASALV SANWGVYIYA ATHSHVVDAA LGYFINPLLS VALGVLVFRE
RINRSQQVAL VLAVAAVVLL TVEIGAPPYI ALALAVSFAL YGLVKKVVTA DPRVSVAVET
LIALPFAGGY VLALELTDRG HFLSEGLAHT GLLLLAGPVT AIPLLLFGAA AQRLPLVTLG
LLFYINPGLQ MAWGVVIGHE PMPVGRWIGF ALIWLALALL AADAVRRRTP RERTSTTPAE
HVDRDESKSS SH
|
|---|
| |