| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3080 |
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| Symbol | |
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| ID | 4111912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 3255464 |
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| End bp | 3257632 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638032210 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_640243 |
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| Protein GI | 108800046 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.836331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTGG TCACCCCCGG ATCCGGGCCC ACTTCACCGA CGCTGCACAC CGTCTGGCCC
GGTGAGGCCT ATCCGCTGGG CGCGACGTAC GACGGGGCGG GCACCAACTT CTCGCTGTTC
TCCGAGGTCG CCGAACGCGT CGAGCTGTGC CTGATCGCCA AGGACGGCAG CGAGGAACGG
ATCAACCTCG ACGAGGTCGA CGGCTACGTC TGGCACGCCT ACCTGCCCAC GGTCACCCCC
GGCCAACGCT ACGGGTTCCG CGTGCACGGT CCGTGGGATC CGTCGGCGGG ACACCGGTGC
GATCCGAGCA AGCTGCTGCT CGATCCGTAC GGCAAATCGT TCTACGGCGA CTTCCGGTTC
GGGCAGGCGC TGTACTCCTA CGACCTCGAC GCCGAGGACC TCGCCTCGGG CGGTGACCCC
CCACGGATCG ACTCGCGGGG GCACACGATG ACCAGCGTCG TCATCAACCC GTTCTTCCAG
TGGGGCTCCG ACCGCGCACC GCGCACGCCG TACCACGACA CCGTGATCTA CGAGGCCCAC
GTCAAGGGGA TGACCCGGCG GCACCCGGCC GTGCCCGCGG AGTTACGCGG CACCTACGCC
GGGCTCTGCC ATCCGGCGAT CATCGACCAC CTCAAGTCGC TCAACGTCAC CGCCATCGAA
CTGATGCCGG TGCACCAGTT CATGCACGAC CACCGCCTGC TCGACCTCGG ATTGCGAAAC
TACTGGGGCT ACAACACGTT CGGCTTCTTC GCACCGCACA ACGAGTACGC CGCCAACCAG
CACGCCGGCG GCGCGGTCGC CGAGTTCAAG GCGATGGTGC GGTCCTTCCA CGCGGCGGGT
ATCGAGGTCA TCCTCGACGT CGTCTACAAC CACACCGCCG AGGGCAACCA CCTCGGGCCG
ACCGTCAACT TCCGCGGTAT CGACAACGCC GCCTACTACC GGCTGCTCGA CGGTGACCTG
CGCCTCTACA AGGACTTCAC CGGGACCGGC AACAGCCTCA ACGCCCGCCA CCCCCACACC
CTGCAGCTCA TCATGGACTC CCTGCGGTAC TGGGTGCTGG AGATGCACGT CGACGGGTTC
CGCTTCGACC TGGCCTCGAC GCTGGCCCGC GAGTTCTACG ACGTCGACCG ACTCTCGGCC
TTCTTCGACC TGGTGCAGCA GGATCCGGTG GTCAGTCAGG TCAAGTTGAT CGCCGAACCG
TGGGACATCG GCGAAGGCGG TTATCAGGTC GGCAACTTCC CAGGTTTGTG GACCGAGTGG
AACGGGCAAT ATCGCGACAC TGTGCGTGAC TACTGGCGGG GAGAACCCGC AACCCTCGGC
GAATTCGCCT CCCGACTGAC GGGATCATCA GACCTCTACG AGGCCACCGG ACGGCGTCCC
AGCGCCTCCA TCAACTTCGT GACCTGTCAC GACGGGTTCA CGATGCACGA TCTGGTGTCC
TACAACGAGA AACACAACGA AGCCAACGGC GAGGACAACC GCGACGGCGA GAGCCACAAC
CGGTCCTGGA ACTGCGGGGT GGAAGGTCCC ACCGACGATC CGGACGTCAT CGCGTTGCGC
GGTAAGCAGA TGCGCAACAT GCTGGCCACG CTGATGTGCA GCCAGGGCAC CCCGATGATC
GCCCACGGTG ACGAGATCGG CCGCACCCAG CAGGGCAACA ACAACGTCTA CTGCCAGGAT
TCGGAACTGT CCTGGATGGA CTGGTCGTTG TGCGAGACCA ACGCCGATCT GCTGGAGTTC
ACCCGCAAGG TGGTCGCCTT CCGCAAGAAC CACCCGGTGT TCCGGCGGCG ACGGTTCTTC
GAGGGCAAAC CGATCCGCAG CGCGGATCAG GTCCGTGACA TCGCCTGGCT GACCCCCGCG
GGCACCGAGA TGACCCCCGA GGACTGGGGC ACCGGCCTGG GCAAGTGCGT GGCGGTCTTC
CTCAACGGTG AGGCGATCCC GGCCCCCAAC GCGCGCGGCG AGCGGGTGGT CGACGATTCG
TTCCTGTTGT GCTTCAACGC CCACGACCAC GTGCAGGACT TCGTCACCCC CGACGGCGAC
TACGCCGAGA TGTGGACCGC CGATCTGGAC ACCGCCGATC CGACCGGGCA CACCGACGTC
GTCGTCCCGG CAGGCGAGAA GATCTCGCTG CAACCCAGAT CGCTGCTCGT GCTGCGGAAG
ACGGCGTGA
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| Protein sequence | MTVVTPGSGP TSPTLHTVWP GEAYPLGATY DGAGTNFSLF SEVAERVELC LIAKDGSEER
INLDEVDGYV WHAYLPTVTP GQRYGFRVHG PWDPSAGHRC DPSKLLLDPY GKSFYGDFRF
GQALYSYDLD AEDLASGGDP PRIDSRGHTM TSVVINPFFQ WGSDRAPRTP YHDTVIYEAH
VKGMTRRHPA VPAELRGTYA GLCHPAIIDH LKSLNVTAIE LMPVHQFMHD HRLLDLGLRN
YWGYNTFGFF APHNEYAANQ HAGGAVAEFK AMVRSFHAAG IEVILDVVYN HTAEGNHLGP
TVNFRGIDNA AYYRLLDGDL RLYKDFTGTG NSLNARHPHT LQLIMDSLRY WVLEMHVDGF
RFDLASTLAR EFYDVDRLSA FFDLVQQDPV VSQVKLIAEP WDIGEGGYQV GNFPGLWTEW
NGQYRDTVRD YWRGEPATLG EFASRLTGSS DLYEATGRRP SASINFVTCH DGFTMHDLVS
YNEKHNEANG EDNRDGESHN RSWNCGVEGP TDDPDVIALR GKQMRNMLAT LMCSQGTPMI
AHGDEIGRTQ QGNNNVYCQD SELSWMDWSL CETNADLLEF TRKVVAFRKN HPVFRRRRFF
EGKPIRSADQ VRDIAWLTPA GTEMTPEDWG TGLGKCVAVF LNGEAIPAPN ARGERVVDDS
FLLCFNAHDH VQDFVTPDGD YAEMWTADLD TADPTGHTDV VVPAGEKISL QPRSLLVLRK
TA
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