Gene Mmcs_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3009 
Symbol 
ID4111841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3179332 
End bp3180510 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content69% 
IMG OID638032138 
Producthypothetical protein 
Protein accessionYP_640172 
Protein GI108799975 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.477214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCGCG TCGGCACTCC GCCCCCTTCG CATCTGCCCG TTTCACCGTG GGCCCGGCAG 
GTCCGCAAGG TCGGCGCCCC GCTGGGCCTG CTGATCGCGC TCGGGACTCT GGCGGGCCTC
CTCGTCATCC TGCTGACCGC GGTCAATCCG GTCGGGACGG CAGTGGGGTT CGTCCTGTCC
AGCATCGCGA TGGCCGTCGT CGTGTTGGCT TACCTGTGGC TGGACCGATG GGAACCCGAA
CCGCCGCGGC TGCTCGTGTT CGCGTTCATC TGGGGCACCT CGGCGGCCGT CGTCATCTCC
GCGGTGCTGC AGCTGTTCCT CGAGGTGTGG CTGAACCCGG CCGTCGGCAC CGCCGATACC
GGTACCAGCC CGGTGACGCT GGTCCTGGGC GCCCCGCTGA CCGAGGAGGC CGCCAAAGGC
CTGTTCCTGC TGATCATGAT GACCGGCGCA CGCCGCAACG AGATGAACTC GCTGACCGAC
TGCCTGGTGT ACGCCGGGCT GGTCGGTGCG GGGTTCGCGT GGCTGGAGGA CATCCTCTAC
ATCGCCAACG GGGAATCGCT GGCCGATTCG CTGCTGACCG CCGCGTTGCG GCTGATCATG
GCGCCGTTCG CGCACTCGCT GTTCACCACG GTGTTCGCGA TCGGGGTCTG GTTCGCCCTG
CACCGCCGCG ACACCGCCGC CCGCGCCGGG TTCCTGCTGC TCGGCTACGC CGGGGCGGTG
CTGCTGCACG CCATGTGGAA CGGTTCGTCA CTGCTCGGGG TGGGAGCGTA CTTCGGGCTC
TACGTGTTCT GGATGATGCC GATCTTCGGG CTCGCGATCG TGCTGGCCGT GCGGAGTCGT
CGCCGTGAAC AGCACATCGT CGCGGCGAAG CTGCCGGGGA TGGTGGCCGC GGGAGTGCTC
ACTCCCGCGG AGGCGGCGTG GCTCGGATCC CTCCGCACCC GCAATCTGGC CATCGCGGAA
GCGAGACGGT TCGGCGGTAA GCAGGCCGGC GATGCGGTGA AGAAGTTCGC CCACCAGGTC
GTCGAATTGG CCTTCGTCCG GGACCGCATC GACCGCGGAT TCGGCGACCC GCGAGTCATC
GGACTGCTGC ACGAGGAGAC CTACGCGCTG TATGCCGCCA GGGCGGCGTC GCCGGCGCTG
CACGGTTTGG GCGAATACCG CGCACCGCGG CCGCTGTGA
 
Protein sequence
MSRVGTPPPS HLPVSPWARQ VRKVGAPLGL LIALGTLAGL LVILLTAVNP VGTAVGFVLS 
SIAMAVVVLA YLWLDRWEPE PPRLLVFAFI WGTSAAVVIS AVLQLFLEVW LNPAVGTADT
GTSPVTLVLG APLTEEAAKG LFLLIMMTGA RRNEMNSLTD CLVYAGLVGA GFAWLEDILY
IANGESLADS LLTAALRLIM APFAHSLFTT VFAIGVWFAL HRRDTAARAG FLLLGYAGAV
LLHAMWNGSS LLGVGAYFGL YVFWMMPIFG LAIVLAVRSR RREQHIVAAK LPGMVAAGVL
TPAEAAWLGS LRTRNLAIAE ARRFGGKQAG DAVKKFAHQV VELAFVRDRI DRGFGDPRVI
GLLHEETYAL YAARAASPAL HGLGEYRAPR PL