| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2993 |
|---|
| Symbol | |
|---|
| ID | 4111825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3161682 |
|---|
| End bp | 3162374 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638032121 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_640156 |
|---|
| Protein GI | 108799959 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCA AGGTGCCCGG CGCAGAGGAC TTCGTTCCCG ACACCCGCGA CGTGTCGATC
CTCGCCGATG CGGTGCAGGC GTGCCGCGGG TGCGAACTCT ATCGCGATGC CACGCAGGGC
GTCTTCGGCC AGGGCAGTGC GAACGCGACC GTCATGTTCG TCGGCGAGCA ACCCGGTGAT
CAGGAGGACC GCGCCGGGGA ACCGTTCGTC GGTCCGGCGG GCAGACTCCT CGACAAAGCG
CTCGTGTCCG CGGGTATCGA CCGGGACGGG GTCTATGTCA CCAACGCCGT CAAACACTTC
AAATTCACAC TGCCCGAACG CGGCAAGCGT CGTATCCACA AGACCCCCAG CCGTACCGAG
GTCGTGGCGT GCCGGCCGTG GTTGCTCGCC GAATTGGACG CCGTGCGGCC GGAAGTCGTG
GTGCTGCTCG GCGCGACGGC AGCGAAAGCT CTGCTGGGCA ACGACTTTCG GTTGACCGCG
CACCGCGGAG AAGTGTTGGC CTTGCCGCCC GTCACCGAGC CGGCCGATCT GCACGTCGAC
CCGGCAGTGG TGGTGACGGC GCATCCGTCG TCGGTGCTGC GGGGACCGGC CGAGAACCGA
CAGCAGGCGT TCGACGCACT CGTCGAGGAT CTACGCGTCG TCGCCCGGTT GATGCGCGGC
GACCGACGTC AACGGCGGTC GCGGCCGAAG TAG
|
|---|
| Protein sequence | MPTKVPGAED FVPDTRDVSI LADAVQACRG CELYRDATQG VFGQGSANAT VMFVGEQPGD
QEDRAGEPFV GPAGRLLDKA LVSAGIDRDG VYVTNAVKHF KFTLPERGKR RIHKTPSRTE
VVACRPWLLA ELDAVRPEVV VLLGATAAKA LLGNDFRLTA HRGEVLALPP VTEPADLHVD
PAVVVTAHPS SVLRGPAENR QQAFDALVED LRVVARLMRG DRRQRRSRPK
|
|---|
| |